Pairwise Alignments

Query, 389 a.a., patatin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)

Query: 32  ALVAQGGGQRGIFTAGVLDAFLLSN-FDPYHEFYGTSAGALNLCAFLSRQTGLSKAFILE 90
           ALV +GGG R I+TAGVLDAFL    + PY    G SAGA+   +++SRQ G +     +
Sbjct: 5   ALVLEGGGLRAIYTAGVLDAFLQQQLYFPY--VIGVSAGAIYPASYVSRQFGRNLTIQQQ 62

Query: 91  LTTRAEFFHLFSYIRRKQYMNMQWALDRIGE--YPYRLDLDMARQALGKRKAYAAVTSAD 148
                 +  L  ++    Y+N  +   R+     P+     ++     K  A+   T   
Sbjct: 63  YLQDKRYMGLRHWLATVNYVNTDFTYKRMAYELLPFDFKTFLSSGTEFKVGAFDCNTGQT 122

Query: 149 DLKDAYFPMLGADWQ------QVLLATCAIPGLYPEPVTLAGKQYIDGGVSASIPVQEAW 202
           D    YF M  AD+Q       VL+A+ ++P     P  +  + Y+DGG++  IP+ +A 
Sbjct: 123 D----YFGM--ADFQDHDKLLDVLIASSSLP-FIANPYRINHQTYLDGGIADPIPMAQAQ 175

Query: 203 RKEARFITVIRTE 215
           +   +   VI T+
Sbjct: 176 QDGYKRQVVILTQ 188