Pairwise Alignments

Query, 389 a.a., patatin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., patatin (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (333), Expect = 1e-35
 Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 23/226 (10%)

Query: 30  KHALVAQGGGQRGIFTAGVLDAFLLSNFDPYHEFYGTSAGALNLCAFLSRQTGLSKAFIL 89
           K AL+A+GGGQRGIFTAGVLDA+L + FDP+    GTSAG+ NL +FL+RQ G +K  I 
Sbjct: 18  KVALIAEGGGQRGIFTAGVLDAWLEAEFDPFDLLIGTSAGSQNLTSFLARQKGYAKKLIR 77

Query: 90  ELTTRAEFFHLFSYIRRKQYMNMQWALDRIGEYPYRLDLDMARQALGKRKAYAAVTSADD 149
            LT    F+ L   +     +++ W  ++     ++LDL  A Q+L  R+     T   D
Sbjct: 78  GLTRHKRFYQLGRGLIGANVIDLDWYFEQTQRGSFKLDLAAASQSLNGRELLITTTRVSD 137

Query: 150 LKDAYF--PMLGADWQQVLLATCAIPGLYPEPV----------------TLAGKQ--YID 189
            +  YF  P     W+++L A+ A+P LY + V                TL  +Q  Y+D
Sbjct: 138 -RQGYFLSPTSHEHWRELLKASSALPFLYKQGVKLTPWLGIESANHVEATLEPEQDFYLD 196

Query: 190 GGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWL 235
           GG++A +PV+EA+++ AR I V+RT  ++++ +  S    +L  W+
Sbjct: 197 GGLAAPLPVREAYKRGARKIVVVRT--VNEDFQAQSAWVHKLKSWI 240



 Score = 43.5 bits (101), Expect = 9e-09
 Identities = 25/66 (37%), Positives = 33/66 (50%)

Query: 310 DLLMVHYQTYTLTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDYELGLKAGYR 369
           D L+ H + Y    +F+    DD  I QI    PL S  L S+   L+ DY+ G+KAG  
Sbjct: 251 DYLVQHEEAYQAELDFIANPPDDVEIVQIFAKAPLQSKLLGSTDVDLRIDYQQGIKAGKA 310

Query: 370 FLKAYS 375
           FL   S
Sbjct: 311 FLATSS 316