Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., xylose repressor from Synechococcus elongatus PCC 7942

 Score =  103 bits (256), Expect = 9e-27
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 16/201 (7%)

Query: 187 PVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHI 246
           PV +AND     L E   G  +   +++L+++  G+G  IVL+G +  GR G   ELG I
Sbjct: 105 PVILANDANCAGLGEVWLGGGRGYRDAILLTLGTGVGGAIVLNGELFVGRTGTAAELGLI 164

Query: 247 QIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADG 306
            +DP G  C+ GN G LE  AS  A++     R    +P           +D+   A+ G
Sbjct: 165 TLDPAGPHCNSGNQGSLEQYASIGAVQ-----RRFGCDP-----------KDLGDRASQG 208

Query: 307 DPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVY 366
           DP A+   Q  GR L A +A ++ +  PE I++GG I+ + +   P++ + +  + LP  
Sbjct: 209 DPEAIAAWQDYGRTLAAGLASLVYVLTPEVIILGGGISGSAAFFLPALTEELHRRVLPTS 268

Query: 367 HQDLKLVESRFYKQATMPGAA 387
            +DL++  +    +A   GAA
Sbjct: 269 REDLQIAIAALGNEAGRVGAA 289