Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  138 bits (347), Expect = 3e-37
 Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 20/387 (5%)

Query: 13  KQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGR 72
           + +N   +  L+ ++G  SR +++  + L+PA++T +  +LI+  L+ E     A ++GR
Sbjct: 30  RAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLLIEGQ-SVAGAQGR 88

Query: 73  PAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIE 132
             + +  +  G   L  +L  G +   + +L    L   ++ +   D D +   L     
Sbjct: 89  RPIPVAIDYAGGVALGFKLMAGSVECVVTDLETTPLASLRLPLPAHDPDTIAEALAAAAP 148

Query: 133 EFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVAN 192
           +          R+  I I +PG++++++ + ++   Y   N+ LG  +    G+PV++ +
Sbjct: 149 KLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGDLVASRIGVPVWLED 208

Query: 193 DTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQG 252
           DT A+A+A++LFG  +      +++I  G+   +VLDG++ +G HG  G+ GH      G
Sbjct: 209 DTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKLYRGAHGAAGKFGHFPHMEGG 268

Query: 253 KRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVD 312
           + C CG  GCL +  S  A+    T   ++G P      E +      AA A GD  A  
Sbjct: 269 RPCECGKRGCLMSYFSEPAMLQ--TWHERSGRPETDGRAEMV------AAIAAGDKAAHS 320

Query: 313 VIQQLGRYLGAAIAIVINLFNPEKILIGG-VINQAKSILYP---SIEQCIREQSLPVYHQ 368
           V+++ G  LG  +A ++N+ +PE I++GG  +    ++  P   ++E+    Q+ PV   
Sbjct: 321 VMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGPLRATLERFAFRQAPPVL-- 378

Query: 369 DLKLVESRFYKQATMPGAALIKQALYD 395
            L   +  + + A    AAL+ Q L+D
Sbjct: 379 -LDWEDDSWARGA----AALVTQKLFD 400