Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 42/357 (11%)

Query: 28  GPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGRPAVGLQTNNLGWQFL 87
           G +SR DL++ + L   +++ I  EL +  L+          RG+P+   +    G   +
Sbjct: 34  GHLSRADLARATALTKQAVSNIIEELENDGLVASLAAVRK-GRGQPSTPYRLVPEGAFAI 92

Query: 88  SMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAA----QLD 143
            +++ R        +L G VL   ++ +     +  +  +L  I+E  Q  +A      D
Sbjct: 93  GLQIDRHVTRTVAVDLIGTVLARNEVILPAGGPETGVEAILTLIDETRQELSAIAPQSRD 152

Query: 144 RVTSIAITLPGL--VNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAE 201
           R+  + + +PG   V+++      M  +  ++  L   +   TGL + + ND  A A AE
Sbjct: 153 RLVGLGVAMPGPFGVDADADDPWMMAAW--QSFPLLERLAAGTGLDLRLQNDAAAAATAE 210

Query: 202 KLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYG 261
           K+ G +  VD+++ + + +GLGAG++L+G + +G HGN GE+G I   P+G    C + G
Sbjct: 211 KMVGAAHGVDHALCVYLGYGLGAGLILNGELYRGAHGNAGEIGMILSRPRG----CSDDG 266

Query: 262 CLETVASSQAIRDQVTARIQAGEPSCLATVEEISIED------ICAAAADGDPLAVDVIQ 315
                      R  +  RI     + L  V EI   D      I A A   D      I 
Sbjct: 267 -----------RAPLEHRISI---ASLCKVLEIDPADGDLYGRIDAVAHLKDRRVAAWIA 312

Query: 316 QLGRYLGAAIAIVINLFNPEKILIGG--------VINQAKSILYPSIEQCIREQSLP 364
                L A I ++  +F+P+ I++ G        ++  A   L PSI +  R++S P
Sbjct: 313 DAAFELRATIQLLETVFDPQTIILCGGMPSGLARLLMDALHPLLPSIAE-RRQRSAP 368