Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ROK family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 11/215 (5%)

Query: 147 SIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGH 206
           S+ + +PG+++   G+V       +    L   + +  G  V VAND   +AL+E + G 
Sbjct: 59  SVGVGIPGVISPYSGLVKNANSTWINGHPLDVHLGELLGREVRVANDANCFALSEAVDGA 118

Query: 207 SQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGK------RCHCGNY 260
           +        + I  G GAG+ ++G+V  G +G  GE GH  +    K      RC CGN 
Sbjct: 119 AAGKSVVFGVIIGTGCGAGVAINGKVHAGGNGIGGEWGHNPLPWMTKEEFNTTRCFCGNP 178

Query: 261 GCLET-VASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGR 319
            C+ET ++ +  +RD   A  +A   + +  V   S  +I +    GD +A+   ++   
Sbjct: 179 DCIETFISGTGFVRDYNEALSRA---ASVQRVPAKSGSEIMSLVDGGDEIALAAFERYVD 235

Query: 320 YLGAAIAIVINLFNPEKILIGGVINQAKSILYPSI 354
            L  ++A VINL +P+ I++GG ++  ++I YP +
Sbjct: 236 RLARSLAHVINLLDPDAIVLGGGMSNVEAI-YPRL 269