Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2E3

 Score =  163 bits (413), Expect = 4e-45
 Identities = 107/292 (36%), Positives = 159/292 (54%), Gaps = 13/292 (4%)

Query: 12  TNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVP 71
           +N    + L LLLF+L S ++ AIN+ KV E+I  P LT++P SHPH+ G+A+LRG  + 
Sbjct: 3   SNKARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTRLPESHPHVKGIATLRGTSLS 62

Query: 72  VIDLRSAIGFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGR 130
           VIDL  AIG   R ++D +   LI+T+ +R+ QG  V  V  I++   T+I+PPP  +G 
Sbjct: 63  VIDLSRAIG--ERPLEDPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGG 120

Query: 131 AN-YLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNHMDGRTILIV 189
              Y+T  T V   D T +V+++D+EKV+  I       +   L       +    IL+V
Sbjct: 121 VRAYITGVTSV---DGT-LVQVLDIEKVIHGIAPAQIETAPTELSMEDAEVLGNARILVV 176

Query: 190 DDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMITDAEMPEM 249
           DDS  A  Q   TL  LGL   +CH    A   +    D  +    ++ ++++D EM EM
Sbjct: 177 DDSQVALQQSVHTLRNLGL---QCHTARSAREAIDCLLDL-QGTAQQINLIVSDIEMSEM 232

Query: 250 DGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKF-QPDL 300
           DGY LT  +R  P    L+I L+TSL  + N    +  G N  ++KF  P+L
Sbjct: 233 DGYALTRTLRETPDFSHLYILLHTSLDSAMNSEKARLAGANAVLTKFSSPEL 284