Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Response regulator receiver:CheW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  288 bits (736), Expect = 1e-82
 Identities = 156/310 (50%), Positives = 205/310 (66%), Gaps = 5/310 (1%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+GV+++V+QRT LVG+NRLELLLF L+ +Q++ INVFKV+EV++ P LT MP S   + 
Sbjct: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLDGKQLYGINVFKVKEVLQCPKLTIMPKSSKIVR 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GVA++RG  +P++DL  A G     +      +IITEYN  +QGFLV  V  I+N  W E
Sbjct: 61  GVANIRGGTIPIMDLAMATG-STGMISLVNSFVIITEYNTKVQGFLVHSVERIVNMNWEE 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPPK  GR +YLTA T V  Q    +VEIIDVEK+LAE+      IS  V+D  + + 
Sbjct: 120 IHPPPKGTGRDHYLTAVTRVDNQ----LVEIIDVEKILAEVAPVSEEISVGVIDAEVQHK 175

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
                +L VDDSS AR QV   L  +G+ ++  +DG QAL+ L     EGK    E LMM
Sbjct: 176 AVSLRVLTVDDSSVARKQVSRCLETVGVEVVALNDGRQALDYLLKMVAEGKKPEEEFLMM 235

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
           I+D EMPEMDGY LT  IRNDPRM+ + ITL+TSLSG FN+AMV+KVG + F++KF+PD 
Sbjct: 236 ISDIEMPEMDGYTLTAAIRNDPRMQKMHITLHTSLSGVFNQAMVKKVGADDFLAKFRPDD 295

Query: 301 LVQVAQERLR 310
           L      R++
Sbjct: 296 LAARVVARIK 305