Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., CheW protein from Pseudomonas syringae pv. syringae B728a

 Score =  361 bits (927), Expect = e-104
 Identities = 183/309 (59%), Positives = 238/309 (77%), Gaps = 5/309 (1%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+G+L+TVDQRT LVGENRLE+L+F L  RQ+FAINVFKV+EV+++P LT MP  H  + 
Sbjct: 1   MAGILDTVDQRTQLVGENRLEILMFRLAGRQLFAINVFKVQEVLQLPKLTLMPQRHSFVC 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GV +LRG+ +PVIDL  AIG  P  V      +I+TEYNR++Q FLVG V  I+N  W  
Sbjct: 61  GVVNLRGQTLPVIDLSQAIGMRPL-VPGPGSTIIVTEYNRSVQAFLVGGVDRIVNMNWDA 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPP SAGR +YLTA + V +Q    +VEIIDVEKVLAEIV Y+A +S+E L++ +L +
Sbjct: 120 IMPPPVSAGRQHYLTAISKVDDQ----LVEIIDVEKVLAEIVPYNAKVSREKLEDPVLEN 175

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
             GR +L+VDDS  A  Q++DTLSQLGL +    DGL+ALN+LK+W D G++++ +LLM+
Sbjct: 176 ARGREVLLVDDSKVALAQLRDTLSQLGLKLHVASDGLKALNMLKAWADAGENVHEKLLMV 235

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
            TDAEMPEMDGY+LT EIRND R++ L+I L+TSLSGSFNE+MV+KVGC+ F+SKFQPD 
Sbjct: 236 FTDAEMPEMDGYRLTTEIRNDARLRGLYIVLHTSLSGSFNESMVKKVGCDNFLSKFQPDK 295

Query: 301 LVQVAQERL 309
           LV+V +ERL
Sbjct: 296 LVEVVRERL 304