Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (RefSeq) from Shewanella amazonensis SB2B

 Score =  273 bits (698), Expect = 4e-78
 Identities = 151/311 (48%), Positives = 206/311 (66%), Gaps = 9/311 (2%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           MS +L +V++RT LVG+NRLELLLF LN RQ F INVFKV+EV++ P LT +P  +P + 
Sbjct: 1   MSSILESVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTGLPKLNPFVR 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQN--LIITEYNRTIQGFLVGQVRNIINTAW 118
           GVA +RG  + VIDL +A G  P    +  QN  +II+EYNR++QGFLV  V  IIN  W
Sbjct: 61  GVAHIRGTTISVIDLSAATGGKPI---ENIQNCFIIISEYNRSVQGFLVNSVERIINMNW 117

Query: 119 TEIQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLL 178
             I PPP+ AGR +YLTA T +  +    +VEI+DVEK+L EI     +IS++   +  +
Sbjct: 118 EAIMPPPQGAGRYSYLTAVTEIDGE----LVEILDVEKILDEISPVRTAISEDTDAQLTI 173

Query: 179 NHMDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELL 238
           +      I+++DDS+ AR Q+   L+ L L I    DG +AL  LK+   E  ++  E+ 
Sbjct: 174 DRGQHFHIMVIDDSAVARKQIIRALTSLELQIDTAKDGREALEKLKAISAEMTNVAHEIP 233

Query: 239 MMITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQP 298
           ++I+D EMPEMDGY LT EIR+DP++KD+ + L+TSLSG FN+AMVQKVG N FI+KF P
Sbjct: 234 LIISDIEMPEMDGYTLTAEIRDDPKLKDIKVILHTSLSGVFNQAMVQKVGANDFIAKFNP 293

Query: 299 DLLVQVAQERL 309
           D L     + L
Sbjct: 294 DELAAAVNKHL 304