Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., purine-binding chemotaxis protein CheW (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.9 bits (159), Expect = 6e-16
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 20  LELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAI 79
           L+ + F L++ + + INV +V+EV++   +  +PG+  ++ G+ +LRG  V VID RS  
Sbjct: 19  LQWVTFRLDN-ETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRF 77

Query: 80  GFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFTH 139
           G  P  V D+ + ++I E  + + G LV  V  ++    +EI   P + G          
Sbjct: 78  GLQPAEVDDSTR-IVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAP-NVGTEESAKFIQG 135

Query: 140 VKEQDKTHIVEIIDVEKVLAE 160
           V  +D   ++ ++D++K+L++
Sbjct: 136 VSNRDNELLI-LVDLDKLLSD 155