Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 183  GRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMIT 242
            GR +L+V+D++T R      L QLG  +IE  DG QAL LL            +  +++ 
Sbjct: 923  GRRLLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSR---------QQFDLVLM 973

Query: 243  DAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISK 295
            D +MP MDGY+ T +IRN+  + DL I   T+ +   ++   +  G N  ISK
Sbjct: 974  DIQMPGMDGYQTTRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISK 1026



 Score = 40.0 bits (92), Expect = 3e-07
 Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 183 GRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMIT 242
           G  +L+V+D+ T+R    + L  LG  +   ++GL A+  ++    +  D+      ++ 
Sbjct: 777 GVRVLLVEDNHTSRLVFSELLRDLGCEVTALNNGLTAMKTIERMAPDSFDV------LLA 830

Query: 243 DAEMPEMDGYKLTYEIRN-DPRMKDLFITLNTSLSGSFNEAMVQ 285
           D ++P +DG +L   IR+ D   +   I + T+ S +  EA ++
Sbjct: 831 DWQLPGLDGLELASWIRHLDSLSRQPGIIIVTAFSQAMLEAQLK 874