Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  434 bits (1116), Expect = e-126
 Identities = 218/313 (69%), Positives = 258/313 (82%), Gaps = 1/313 (0%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+ VL +VDQRT LVGENRLELLLF +N+ Q+FAINVFKV+EV+K+P L+ +PGSHP I 
Sbjct: 1   MAKVLESVDQRTQLVGENRLELLLFRINATQLFAINVFKVKEVVKLPKLSALPGSHPSIK 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GVA++RG  +PVIDLR+AIGF P    D E NLIITEYNR++QGF+VG+V +IIN  W++
Sbjct: 61  GVANIRGTSIPVIDLRAAIGFQPMN-SDQEANLIITEYNRSVQGFMVGKVDHIINMTWSD 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPPKS G  NYLTA T V+    T +V IIDVEKVLAEIVHYD +IS+ VLDE+L++ 
Sbjct: 120 IMPPPKSTGSHNYLTAITKVEVDGATRLVSIIDVEKVLAEIVHYDIAISEGVLDEALVDK 179

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
           M GR ILI DDS+TAR QVKDTL+ LG+ +IE  DGLQAL LLK WCDEG+DI  E+LM+
Sbjct: 180 MIGRKILIADDSATARRQVKDTLAPLGIEVIETSDGLQALKLLKRWCDEGRDINQEILML 239

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
           ITDAEMPEMDGY+LTYE+RND RM +LFITLNTSLSGSFN AMV+KVGC+RFISKFQPDL
Sbjct: 240 ITDAEMPEMDGYRLTYEVRNDKRMANLFITLNTSLSGSFNNAMVEKVGCDRFISKFQPDL 299

Query: 301 LVQVAQERLREVL 313
           LV V QERLR  L
Sbjct: 300 LVDVVQERLRTQL 312