Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  183 bits (465), Expect = 4e-51
 Identities = 94/282 (33%), Positives = 164/282 (58%), Gaps = 9/282 (3%)

Query: 22  LLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAIGF 81
           LLLF L+  Q+FA+   K+RE++    L+ +P SHP I G A++RG  +P+ID+ +A+G+
Sbjct: 28  LLLFRLSHTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMAAAVGY 87

Query: 82  PPRRVQD-TEQNLIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFTHV 140
            P   ++     +IIT+  R + GFLV  +  II   W +I+ PP + G+  +LT  T V
Sbjct: 88  APITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKNAFLTGVTRV 147

Query: 141 KEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNHMDGRTILIVDDSSTARNQVK 200
            ++    +V+++DVE +L++I       ++ +L +     +    IL+VDDS  AR Q+ 
Sbjct: 148 DDK----LVQLLDVELLLSKIFPASPDTTRAILTDVQREILKPLNILLVDDSMVARKQLS 203

Query: 201 DTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMITDAEMPEMDGYKLTYEIRN 260
           D L  + +  +   DG  AL++++    EG+ +     ++++D EMP +DGY+L +E++N
Sbjct: 204 DALDSINIPYLVTSDGRDALSIMEEAAKEGRPVD----LLVSDIEMPGLDGYELAFEVKN 259

Query: 261 DPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDLLV 302
            P + D +I L+TSLS   + +   +VG N  ++KF    L+
Sbjct: 260 TPALADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELI 301