Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  280 bits (717), Expect = 2e-80
 Identities = 152/310 (49%), Positives = 211/310 (68%), Gaps = 7/310 (2%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           MS +L +V++RT LVG+NRLELLLF LN RQ F INVFKV+EV++ P LT +P  +P++ 
Sbjct: 1   MSSILESVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTGLPKLNPYVR 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWT 119
           GVA +RG+ + VIDL +A G  P  ++DTE   +II+EYNR++QGFLV  V  IIN  W 
Sbjct: 61  GVAHIRGQTISVIDLSAATGGRP--IEDTEGCFIIISEYNRSVQGFLVKSVERIINMNWE 118

Query: 120 EIQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLN 179
            I PPP+ AGR +YLTA T ++ +    +VEI+DVEK+L EI      IS+EV ++  ++
Sbjct: 119 AIMPPPQGAGRYSYLTAVTEIEGE----LVEILDVEKILDEISPVKTQISQEVDEQLTID 174

Query: 180 HMDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLM 239
                 I+++DDS+ AR Q+   L  L L I    DG +AL+ L S   E  ++  E+ +
Sbjct: 175 RERHYHIMVIDDSAVARKQIIRALESLSLQIDTAKDGREALDKLVSVAAEMDNVAHEIPL 234

Query: 240 MITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPD 299
           +I+D EMPEMDGY LT EIR++P++KD+ + L+TSLSG FN+AMV+KVG N FI+KF PD
Sbjct: 235 IISDIEMPEMDGYTLTAEIRDNPKLKDIKVVLHTSLSGVFNQAMVEKVGANDFIAKFNPD 294

Query: 300 LLVQVAQERL 309
            L     + L
Sbjct: 295 ELAAAVNKHL 304