Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., response regulator receiver modulated CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 89/318 (27%), Positives = 150/318 (47%), Gaps = 45/318 (14%)

Query: 30  RQIFAINVFKVREVIKVPLLTKMPGS-HPHITGVASLR-GEPVPVIDLRSAIGFPPRRVQ 87
           R+ + +NV KV E+I++  +T +P   HP + G    R G  +P++DL   +G P  R  
Sbjct: 80  RRRYGVNVAKVVEIIRMQPITALPQMPHPAVLGAFPHRDGRVIPLVDLAKYLGIP--RDT 137

Query: 88  DTEQNLIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRA--NYLTAFTHVKEQDK 145
             E  +I+TE+N  I GF+V  V  I   +WT+++ P +    A  N +T    + E+  
Sbjct: 138 SGEPKIIVTEFNTVITGFMVSGVNRIHRISWTDVEAPGRFLQEASRNSITGMVRLDER-- 195

Query: 146 THIVEIIDVEKVLAEIVHYDASISKEVLDESL--------LNHMDGRT------------ 185
             +V ++D+E ++AE +H D SI  E    S          +  DG T            
Sbjct: 196 --VVFLLDMESIVAE-MHPDLSIRMERPLASASAGERGQGADAADGATEAVPPVAQPDLP 252

Query: 186 -----ILIVDDSSTARNQVKDTLSQLG-LNIIECHDGLQALNLLKSWCDE----GKDIYS 235
                IL  DDS + R  V++ +   G   +++ +DG +A ++L     E    G  +  
Sbjct: 253 PRRYRILHADDSGSVRRLVRNLMEASGRFELLQANDGQEAWDMLDGLRREAESRGVPLSD 312

Query: 236 ELLMMITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISK 295
            +  +++D EMP MDG  L   I+ D  ++ L + L +SL         + VG +   +K
Sbjct: 313 LVQAVVSDIEMPRMDGLTLCRRIKEDSALRALPVALFSSLVSERLGHKGESVGADAQFAK 372

Query: 296 FQPDLLVQVAQERLREVL 313
             PDL  Q   +++ E+L
Sbjct: 373 --PDL--QQLSQKVLELL 386