Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  283 bits (724), Expect = 4e-81
 Identities = 152/310 (49%), Positives = 211/310 (68%), Gaps = 7/310 (2%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           MS +L++V++RT LVG+NRLELLLF LN RQ F INVFKV+EV++ P LT +P  +P++ 
Sbjct: 1   MSSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVK 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWT 119
           GVA +RG  + VIDL +A G  P  +  TE   +II+EYNR++QGFLV  V  IIN  W 
Sbjct: 61  GVAHIRGTTISVIDLSAATGGRP--LASTENCFIIISEYNRSVQGFLVSSVERIINMNWE 118

Query: 120 EIQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLN 179
            I PPP+ AGR +YLTA T ++ +    +VEI+DVEK+L EI     +IS+EV  +  ++
Sbjct: 119 AIMPPPQGAGRYSYLTAVTEIEGE----LVEILDVEKILDEISPVKTAISEEVNQQLTID 174

Query: 180 HMDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLM 239
                 I+++DDS+ AR Q+  +L  L L I    DG +AL+ LK+   E  ++  E+ +
Sbjct: 175 RTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAIASEMNNVADEIPL 234

Query: 240 MITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPD 299
           +I+D EMPEMDGY LT EIR+DP++K++ + L+TSLSG FN+AMVQKVG N FI+KF PD
Sbjct: 235 IISDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPD 294

Query: 300 LLVQVAQERL 309
            L     + L
Sbjct: 295 ELAAAVNKHL 304