Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 4e-15
 Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 4/141 (2%)

Query: 20  LELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAI 79
           L+ + F L++ + + INV +V+EV++   +  +PG+  ++ G+ +LRG  V VID RS  
Sbjct: 19  LQWVTFKLDN-ETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRF 77

Query: 80  GFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFTH 139
           G     V D+ + ++I E  + + G LV  V  ++    +EI   P + G          
Sbjct: 78  GLQSAEVDDSTR-IVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAP-NVGTEESAKFIQG 135

Query: 140 VKEQDKTHIVEIIDVEKVLAE 160
           V  +D   ++ ++D++K+L++
Sbjct: 136 VSNRDNELLI-LVDLDKLLSD 155