Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  180 bits (456), Expect = 4e-50
 Identities = 99/285 (34%), Positives = 166/285 (58%), Gaps = 13/285 (4%)

Query: 22  LLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAIGF 81
           LLLF L+  QIFA+   K+RE++    L+K+P SHP I G A++RG  +PV+D+ +AIG+
Sbjct: 11  LLLFRLSQHQIFALGTLKIRELVPYTPLSKIPQSHPTILGAATIRGHTIPVVDMAAAIGY 70

Query: 82  PPRRVQDTEQN---LIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFT 138
            P  V D E+    +IIT+  R I GFLV  +  II   W +I+ P  + G+  +LT  T
Sbjct: 71  RP--VSDEERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANLGKNAFLTGVT 128

Query: 139 HVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNHMDGRTILIVDDSSTARNQ 198
               Q    +V+++DVE +L+++       ++ +L +     +  R IL+VDDS  AR Q
Sbjct: 129 RYDNQ----LVQLLDVELLLSKVFPDAPEANRAILTDVQREKLKPRRILLVDDSKVARKQ 184

Query: 199 VKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMITDAEMPEMDGYKLTYEI 258
           + D L  + +      DG +AL++++    E    +  + ++++D EMP +DGY+L +E+
Sbjct: 185 LSDALDSINIPYFVTPDGREALSIMEQAAAE----HHPIDILVSDIEMPGLDGYELAFEV 240

Query: 259 RNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDLLVQ 303
           R++P + + +I L+TSLS   + +   +VG N  ++KF    LV+
Sbjct: 241 RDNPLLANAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVE 285