Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 6e-14
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 11/153 (7%)

Query: 12  TNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVP 71
           TN VG+    L   S N    FAI +  V+E+I++  +T++P     + G+ +LRG+ VP
Sbjct: 10  TNSVGDITQYLTFQSANDT--FAIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGKVVP 67

Query: 72  VIDLRSAIGFPPRRVQDTEQNLIIT---EYNRTIQGFLVGQVRNIINTAWTEIQPPPKSA 128
           VIDL   +G     +      +++    E  R   G LV +V  I+       QPPP   
Sbjct: 68  VIDLSKRLGRLTTVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPPDFG 127

Query: 129 G--RANYLTAFTHVKEQDKTHIVEIIDVEKVLA 159
              R +++ A   V E    H + ++D+  VL+
Sbjct: 128 ADLRVDFIRAMGRVGE----HFMILLDINYVLS 156