Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  450 bits (1158), Expect = e-131
 Identities = 226/313 (72%), Positives = 266/313 (84%), Gaps = 1/313 (0%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+ VL TVDQRTNLVGENRLELLLF +NS Q+FAINVFKV+EV+K+P L  MPGSHPHI+
Sbjct: 1   MANVLATVDQRTNLVGENRLELLLFRINSMQLFAINVFKVKEVVKLPPLNAMPGSHPHIS 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GVA++RG  +PVIDLRSAIGF P    DT  N+IITEYNR++QGFLVG+V +IIN  W++
Sbjct: 61  GVANIRGMSIPVIDLRSAIGFKPVPPDDTA-NMIITEYNRSVQGFLVGKVEHIINMTWSD 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPPK+AGR NYLTA T +  Q ++ +V IIDVEKVLAEIVHYD S+S+ VLDESLL+ 
Sbjct: 120 IMPPPKTAGRNNYLTAITRIDYQGQSQLVSIIDVEKVLAEIVHYDISLSEGVLDESLLDK 179

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
           M GR ILIVDDSSTAR QV++TL QLG+ IIE  DGLQAL+LL+ W DEGK++  ELLMM
Sbjct: 180 MPGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALHLLQKWRDEGKNVTKELLMM 239

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
           ITDAEMPEMDGYKLTYE+RND  M DLFITLNTSLSGSFN AMV+KVGC+RFISKFQPDL
Sbjct: 240 ITDAEMPEMDGYKLTYEVRNDKAMADLFITLNTSLSGSFNNAMVEKVGCDRFISKFQPDL 299

Query: 301 LVQVAQERLREVL 313
           LV+V Q+RL+++L
Sbjct: 300 LVEVVQDRLKQIL 312