Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., chemotaxis protein CheV from Herbaspirillum seropedicae SmR1

 Score =  167 bits (423), Expect = 3e-46
 Identities = 99/313 (31%), Positives = 178/313 (56%), Gaps = 16/313 (5%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNS------RQIFAINVFKVREVIKVPLLTKMPG 54
           M      +D+RTNL   N+ ELLLF L +       ++F INVFK+RE++ +P +TK  G
Sbjct: 1   MDNFQKEIDERTNLTASNKFELLLFRLGTDPHGERSELFGINVFKIREIVPMPPVTKAAG 60

Query: 55  SHPHITGVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNII 114
           +   + G+ ++RG+ + VIDL + +G  P+   +    L++TEY R+ Q F V  V  I+
Sbjct: 61  TQSPMLGMVNIRGQIISVIDLPAVVGCVPKTGLNI---LLVTEYARSTQAFAVESVDEIV 117

Query: 115 NTAWTEIQPPPKSAGRANYLTAFTHVK-EQDKTHIVEIIDVEKVLAEIVHYDASISKEVL 173
              W+++     S+G A ++T+   +  ++D + + +++DVE++L EI+  D  +  E L
Sbjct: 118 RLEWSQVLSAETSSGGA-FVTSIARLDADKDTSRLAQVLDVEQILHEIMPTDRDLKMESL 176

Query: 174 DESLLNHMDGRTILIV-DDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDE--- 229
           ++S  + +   T+ I  DDS  AR+ ++  L  + +       G +A   ++    E   
Sbjct: 177 EKSASHGIRPGTVAIAADDSKVARSLIEQGLRAMEIPYEMHVTGKEAWEKIQKLAREARA 236

Query: 230 -GKDIYSELLMMITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVG 288
            G+ I  ++  ++TD EMPEMDG+ LT  I+ +  +K + + +++SLSGS NE  V+ VG
Sbjct: 237 EGRPISDKISFVLTDLEMPEMDGFTLTRNIKREDYLKSIPVIIHSSLSGSANEDHVRSVG 296

Query: 289 CNRFISKFQPDLL 301
            + +++KF+ + L
Sbjct: 297 GDAYVAKFEANEL 309