Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  442 bits (1138), Expect = e-129
 Identities = 221/313 (70%), Positives = 264/313 (84%), Gaps = 1/313 (0%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+ VL TVDQRT LVGENRLELLLF +NS Q+FAINVFKV+EV+K+P L  MPGSHPHI 
Sbjct: 1   MANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNSMPGSHPHIF 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GVA++RG  +PVIDLRSAIGF P    D + N+IITEYNR++QGFLVG+V +IIN  W++
Sbjct: 61  GVANIRGMSIPVIDLRSAIGFKPVPPGD-DANMIITEYNRSVQGFLVGKVEHIINMTWSD 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPPK+AGR NYLTA T ++ Q ++ +V IIDVEKVLAEIVHYD  +S+ VLDESLL+ 
Sbjct: 120 IMPPPKTAGRNNYLTAITRIEYQGQSQLVSIIDVEKVLAEIVHYDIRLSEGVLDESLLDK 179

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
           M G+ +LIVDDSSTAR QV++TL QLG+ IIE  DGLQAL+LL+ W DEGK++  ELLMM
Sbjct: 180 MPGKKVLIVDDSSTARRQVRETLGQLGIEIIEASDGLQALHLLQKWRDEGKNVAQELLMM 239

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
           ITDAEMPEMDGYKLTYE+RND  M DLFITLNTSLSGSFN AMV+KVGC+RFISKFQPDL
Sbjct: 240 ITDAEMPEMDGYKLTYEVRNDKAMSDLFITLNTSLSGSFNNAMVEKVGCDRFISKFQPDL 299

Query: 301 LVQVAQERLREVL 313
           LV+V Q+RL++V+
Sbjct: 300 LVEVVQDRLKQVI 312