Pairwise Alignments

Query, 325 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ferric uptake regulator, CjrA, predicted from Marinobacter adhaerens HP15

 Score =  196 bits (497), Expect = 9e-55
 Identities = 121/338 (35%), Positives = 183/338 (54%), Gaps = 33/338 (9%)

Query: 19  LMRTIAALFLSFSLL---GCSATPTQVS---------TFYDYQLATPTGER-ISLQRLPA 65
           +M+ IA + L  +L    GC+A P+  +         T YD +L  P  +  ++ + L  
Sbjct: 1   MMKPIAPILLFATLSAMNGCTAMPSLKAPDTLNSAPRTQYDAKLVNPANKTALTPEELAQ 60

Query: 66  EIENADVILVGEWHTHAGIHRFQTDLLKQMTENGHPMVLSMEQFTRDAQPLMDDYLTGKI 125
           ++ + DV++VGE+H H G H  Q+ L   +       +LSMEQF  D Q  ++ YL G+ 
Sbjct: 61  QLADVDVVVVGEYHGHHGSHLLQSRLQSALFRLRPEQILSMEQFNLDHQDELNRYLRGET 120

Query: 126 GEQYLIQKANAWPNYESDYRPLVEFAKSQQLPVIAANAPKPIVRCIGRVGIDYLDRLSPE 185
           GE  +I+ A AW NY + YRPLVEFA+   LPVIA+NAP  +VRC+GR G  YLDR+S  
Sbjct: 121 GETEMIEDAEAWDNYRASYRPLVEFARRHDLPVIASNAPADVVRCVGRKGPGYLDRISDT 180

Query: 186 QRQWVATEVNIQDSPYKSTFMASMHHGNPAQN------ENQYAAQVTWDETMAESIVRYL 239
            RQ +     +  S Y+  FMA++   + A +      +N Y AQ+  D TMA  I++  
Sbjct: 181 LRQNLPATPFMDTSEYREKFMAAIGASHQADDTMSERMDNTYKAQLLRDNTMATRILQAR 240

Query: 240 AANPERKVLHIAGMFHTQQGLGTAASILRRNPNLKVVIITPV---GEISPQSDD------ 290
             +PE +VLH+ G FH++ GLGT A + +R P + V +++PV    E++    D      
Sbjct: 241 TEHPEHQVLHVTGTFHSENGLGTVALLKQRAPEISVAVVSPVFWPSEVNEAPLDNNRAKG 300

Query: 291 ---YQLQVLTPPVRYVQKAHQAEAINALKNRNTDLVCE 325
              Y +Q L    R  Q+  + EA+ A   R+TD  C+
Sbjct: 301 DFIYFIQPLPDEFRDAQR--EREAMTARFRRSTDKSCD 336