Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 6e-50
 Identities = 102/260 (39%), Positives = 147/260 (56%), Gaps = 12/260 (4%)

Query: 5   CPLCEHPLTLNQNTYACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQARRRFLHT 64
           CP+C  PL    N   C   H+FD A++GY+NL+PVQHK S+DPGDN  M +ARR FL+ 
Sbjct: 4   CPICSEPLNAVDNGVVCPAGHRFDRARQGYLNLLPVQHKNSRDPGDNLAMVEARRDFLNA 63

Query: 65  GHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDSEAQIFGLDISKI 124
           GHYAP+  ++A L       R    LDIGCGEGYYT   A+AL   D     + LDIS+ 
Sbjct: 64  GHYAPVARRLAELAAERAPGR---WLDIGCGEGYYTAQIAEALPNADG----YALDISRE 116

Query: 125 AIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGGIVITVTPA 184
           A++ A KR P+  + +AS  R+P A+     +  +++P    E +R +  GG ++ V P 
Sbjct: 117 AVKRACKRNPQLTWLIASMARVPLADGCCQFLASVFSPLDWQEAKRLLSPGGGLMKVGPT 176

Query: 185 ARHLYQFKQGIYDQVRLHEEQPETL---SGFELVEECKLHYPMALN-GSEAADLLQMTPF 240
           A HL + +  +YD+VR + +         G  L     L + + LN G + A+LL MTP 
Sbjct: 177 AGHLMELRGRLYDEVREYIDDKHLALVPPGMVLDHSETLEFKLTLNGGQDRANLLAMTPH 236

Query: 241 AWRASEDFKHRV-SQSDTFE 259
            WRAS + +  V  Q++ F+
Sbjct: 237 GWRASAERRASVIEQAEPFQ 256