Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ribosomal RNA large subunit methyltransferase A, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (249), Expect = 3e-26
 Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 6/274 (2%)

Query: 1   MTFLCPLCEHPLTLNQNT--YACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQAR 58
           M F CPLC   L  ++ +  + C  +H FD  + GY +       R+    ++++  +AR
Sbjct: 1   MEFQCPLCRQRLHFHEESRGWHCDGKHHFDKKEIGYWDFYKGNKPRN---AESRQELRAR 57

Query: 59  RRFLHTGHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDSEAQIFG 118
           +  + +G + P  E +  + QT     ++  +++G G  +     A+AL + +   ++F 
Sbjct: 58  QFLVTSGLFQPAVEAMVKVLQTQDCGSERNCVNLGPGHAWIGKLLAQALSEHELPLKVFS 117

Query: 119 LDISKIAIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGGIV 178
              S+     AAK   E    +     LPFA+ S D V  +  P K  E +R +K GG++
Sbjct: 118 PLESENEAFAAAKSGMEA-VCLTPLKSLPFADASADMVWLLDIPAKGKEWQRILKPGGLL 176

Query: 179 ITVTPAARHLYQFKQGIYDQVRLHEEQPETLSGFELVEECKLHYPMALNGSEAADLLQMT 238
           + +    RHL+Q K+ +Y+ +       E    F+L+ +  + +  AL+ ++A  L+ M 
Sbjct: 177 LMLAAGPRHLWQIKEFVYEGLTEKPFVLELSGQFDLISQTPVSWTHALSVADAKVLMGMA 236

Query: 239 PFAWRASEDFKHRVSQSDTFECEADFMLRVYRRK 272
           P+AWR  E     + + D    E D+ + + +++
Sbjct: 237 PWAWRVKEASLKAMEKGDFSGLEMDYRIILAKKR 270