Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., 23S rRNA methyltransferase A (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (615), Expect = 1e-68
 Identities = 129/271 (47%), Positives = 173/271 (63%), Gaps = 4/271 (1%)

Query: 1   MTFLCPLCEHPLTLNQNTYACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQARRR 60
           M +LCP+C+  L+L   T+ C   H+FD AKEGYVNL+PVQ KRSKDPGDNKEM  ARR 
Sbjct: 1   MNYLCPICQRTLSLIDRTWCCEANHRFDCAKEGYVNLLPVQKKRSKDPGDNKEMMFARRE 60

Query: 61  FLHTGHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDSEAQIFGLD 120
           FL+ G+Y  M ++V  L Q Y  + +  L DIGCGEGYY+    +A+   +S + + GLD
Sbjct: 61  FLNKGYYEAMSDRVNALAQEYAGEARHGL-DIGCGEGYYSHRLLQAMGSAESFS-LSGLD 118

Query: 121 ISKIAIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGGIVIT 180
           ISK A++YAAKRYP+ QF VASS  +PFA+QS D ++RIYAP +D EL R  K G I+IT
Sbjct: 119 ISKSALKYAAKRYPDIQFCVASSFEMPFADQSFDFMLRIYAPSQDDELRRVAKPGAILIT 178

Query: 181 VTPAARHLYQFKQGIYDQVRLHEEQPETLSGFELVEECKLHYPMALNGS-EAADLLQMTP 239
           V+   +H +  KQ IYDQ R + E    + GFE +   +L   M ++ S +    L MTP
Sbjct: 179 VSAGPQHHFALKQVIYDQPRPNPEVDSQIVGFERLHSERLTQSMTISDSADIGHFLAMTP 238

Query: 240 FAWRASEDFKHRVSQSDTFECEADFMLRVYR 270
           + W+ + D +  +  S    CE DF L V+R
Sbjct: 239 YNWKFT-DAQRALLTSKPLTCELDFKLEVFR 268