Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ribosomal RNA large subunit methyltransferase A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  242 bits (617), Expect = 7e-69
 Identities = 126/271 (46%), Positives = 173/271 (63%), Gaps = 4/271 (1%)

Query: 1   MTFLCPLCEHPLTLNQNTYACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQARRR 60
           M ++CPLC  PL L + T+ C   H+FD+AKEGYVNL+PVQ K SKDPGDN++M  ARR 
Sbjct: 1   MQYICPLCALPLALTERTWGCPQSHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMFARRE 60

Query: 61  FLHTGHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDSEAQIFGLD 120
           FL+ G+Y  + ++V  L   Y +  +Q +LDIGCGEGYY+     AL    S   + G+D
Sbjct: 61  FLNAGYYQNLSDRVNQLALQYASSAKQ-ILDIGCGEGYYSHRLYNALVAHHS-CHLQGVD 118

Query: 121 ISKIAIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGGIVIT 180
           ISK AI+YAAKRY    F VAS++ +P ++ S+D  IRIYAP K  EL+R +  GGI+IT
Sbjct: 119 ISKSAIKYAAKRYQNLSFCVASAYEIPISSNSVDLAIRIYAPSKVEELQRIMAPGGILIT 178

Query: 181 VTPAARHLYQFKQGIYDQVRLHEEQPETLSGFELVEECKLHYPMALNGS-EAADLLQMTP 239
           V+P   H +  KQ IYDQ RLH E    + GFE + + +L   + LN S + ++ L+MTP
Sbjct: 179 VSPGPLHHFALKQQIYDQPRLHPESEARIEGFESLHQERLRSQLVLNHSQDISNFLEMTP 238

Query: 240 FAWRASEDFKHRVSQSDTFECEADFMLRVYR 270
           +AW+ + + K   +      CE DF + VYR
Sbjct: 239 YAWKFTAEQKQAFALGG-LSCELDFQIEVYR 268