Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., ribosomal RNA large subunit methyltransferase A, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (331), Expect = 1e-35
 Identities = 83/270 (30%), Positives = 132/270 (48%), Gaps = 7/270 (2%)

Query: 1   MTFLCPLCEHPLTLNQNT--YACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQAR 58
           + F CP C   L  +Q +  + C N+H FD    GY   +  +  R K  GD+++  +A+
Sbjct: 3   LLFQCPTCGLALMQHQASQGFYCANKHHFDKNAAGY--WVFTKPARQKPTGDSRQQVRAK 60

Query: 59  RRFLHTGHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDS--EAQI 116
              L +G + P+ +K+  +   +L      LLD  C EG+Y    +  L +  +    Q 
Sbjct: 61  HFLLESGVFTPLIDKIGEMIAAHLQPND-CLLDYECAEGFYLRALSSTLSKLTNGINVQY 119

Query: 117 FGLDISKIAIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGG 176
            G+  ++  I  AAK        + +S  LPFA+  LD +  +  P K  E  R +K  G
Sbjct: 120 TGVADAENTIFAAAKAQTPAALCLTTSKVLPFADNCLDFITVVDRPLKGKECVRILKEQG 179

Query: 177 IVITVTPAARHLYQFKQGIYDQVRLHEEQPETLSGFELVEECKLHYPMALNGSEAADLLQ 236
            ++ V P ARHL+Q K  IY ++     Q    SG  + E+ +L + +++ G +A  LL 
Sbjct: 180 FMLQVIPGARHLWQIKALIYPELAEKSVQVNLPSGLTVKEQQRLQFSLSVTGEQALVLLD 239

Query: 237 MTPFAWRASEDFKHRVSQSDTFECEADFML 266
           MTP+AWRAS+  KH +      + E DF L
Sbjct: 240 MTPYAWRASDKVKHLIRSQAFDKLEIDFTL 269