Pairwise Alignments

Query, 272 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., 23S rRNA methyltransferase A (RefSeq) from Shewanella sp. ANA-3

 Score =  243 bits (620), Expect = 3e-69
 Identities = 125/271 (46%), Positives = 174/271 (64%), Gaps = 4/271 (1%)

Query: 1   MTFLCPLCEHPLTLNQNTYACINRHQFDVAKEGYVNLMPVQHKRSKDPGDNKEMTQARRR 60
           M ++CPLC  PLTL + T+ C   H+FD+AKEGYVNL+PVQ K SKDPGDN++M  ARR 
Sbjct: 1   MQYICPLCALPLTLTERTWGCPQAHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMLARRE 60

Query: 61  FLHTGHYAPMREKVATLCQTYLTDRQQTLLDIGCGEGYYTDFFAKALRQQDSEAQIFGLD 120
           FL  G+Y  + ++V  L   Y ++ +Q +LDIGCGEGYY+      L   +   Q+ G+D
Sbjct: 61  FLTAGYYQSLSDRVNELALAYASEARQ-ILDIGCGEGYYSHRLYNTL-VAEHPCQLKGVD 118

Query: 121 ISKIAIRYAAKRYPECQFAVASSHRLPFANQSLDGVIRIYAPCKDTELERCIKIGGIVIT 180
           ISK AI+YAAKRYP   F VAS++ +P  + S+D  IRIYAP K  EL+R +   GI+IT
Sbjct: 119 ISKSAIKYAAKRYPNLSFCVASAYEMPIPSHSIDLAIRIYAPSKVEELQRVMAPNGILIT 178

Query: 181 VTPAARHLYQFKQGIYDQVRLHEEQPETLSGFELVEECKLHYPMALNGS-EAADLLQMTP 239
           V+P   H +  KQ IY + RLH      ++GFE + + +L   + LN S + +  L+MTP
Sbjct: 179 VSPGPLHHFALKQQIYAEPRLHPASDAKIAGFECLYQERLRSQLELNNSQDISHFLEMTP 238

Query: 240 FAWRASEDFKHRVSQSDTFECEADFMLRVYR 270
           +AW+ + + KH  +QS    CE DF + V+R
Sbjct: 239 YAWKFTAEQKHTFAQSG-LSCELDFQIEVHR 268