Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Peptidase, U7 family from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426
           VVLR++S GG   +  +  +++  ++ AG P+ V +  +AASGGY ++   +KI++ P  
Sbjct: 130 VVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 189

Query: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTG-LTQGAKDAIQLGIEHGYQ 485
           + GSIG+ + +    + L    I  + +    +       G  T+  ++  Q  ++  ++
Sbjct: 190 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHE 249

Query: 486 RFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYN 545
            F + V+  R     A+DE+A G VW    AQ  GLVD+L   D+  +LA      + Y+
Sbjct: 250 LFKNFVSNYR--PQLAIDEVATGEVWLGVAAQGKGLVDELKTSDE--YLAERAKGAELYH 305

Query: 546 LYWVE 550
           L++ E
Sbjct: 306 LHYAE 310



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 157 YYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDD 216
           Y +A   +KI  AP   +   G  A       LL+K D+   V   G YK  +  F   +
Sbjct: 174 YMMACIGEKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVF--GE 231

Query: 217 MSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFVAQLKEVNGDLAALSKKV 276
            ++  RE     L      + + V+  R        P +        EV   +AA  K  
Sbjct: 232 NTEKGREKFQEDLDITHELFKNFVSNYR--------PQLAIDEVATGEVWLGVAAQGK-- 281

Query: 277 GLVDELATRQQ 287
           GLVDEL T  +
Sbjct: 282 GLVDELKTSDE 292