Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Peptidase S49, SppA from Pseudomonas syringae pv. syringae B728a

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 84/249 (33%), Positives = 123/249 (49%), Gaps = 30/249 (12%)

Query: 328 AVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRNE 387
           A++   G I D    +     + +   L++A  D   K V+LR++SPGGS   S  + +E
Sbjct: 81  ALIDVQGVIAD----KEAASAENIVTALQKAFEDEKTKGVILRINSPGGSPVQSGYVYDE 136

Query: 388 IEALKAAGKP---VVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGL 444
           I  L+AA KP   V   ++ L ASG Y+I+ +AD+I A   +L GSIG+ +    F   +
Sbjct: 137 IRRLRAA-KPDIKVYAVITDLGASGAYYIASAADQIYADKASLVGSIGVTAAGFGFVGAM 195

Query: 445 NNLGI----YTDG---VGTTPFSGQGL-TTGLTQGAKDAIQLGIEHGYQRFISLVAEKRG 496
           + LG+    YT G       PF  Q    T   QG  D         +++FI+ V + RG
Sbjct: 196 DKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTT-------HRQFIASVKQGRG 248

Query: 497 LTLKAVD--ELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLT 554
             LK  D  EL  G +WT + A  LGLVD LG    A ++A D+ +      Y VEE  +
Sbjct: 249 DRLKDKDHPELFSGLIWTGEQAVALGLVDGLG---SASYVARDVIKEKDIVEYTVEE--S 303

Query: 555 PAQQFLQDL 563
           P  +F + L
Sbjct: 304 PFDRFSKKL 312



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 34/214 (15%)

Query: 59  VLNLSGPIVEQSTHINPMDSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALG 118
           +L+  G    +S+H   +D        E    EN    IV  L+ A  D    G++L + 
Sbjct: 66  MLDFEGGTSRRSSHTALIDVQGVIADKEAASAEN----IVTALQKAFEDEKTKGVILRIN 121

Query: 119 DMPETNLTKLRYIAKAINEFKASGKP---VFAV-GDFYNQSQYYLASYADKIYLAPDGAV 174
             P  +  +  Y+   I   +A+ KP   V+AV  D      YY+AS AD+IY      V
Sbjct: 122 S-PGGSPVQSGYVYDEIRRLRAA-KPDIKVYAVITDLGASGAYYIASAADQIYADKASLV 179

Query: 175 LLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWS 234
              G +A    +   ++KL V    +  G +K+ ++PF      +          TQ W 
Sbjct: 180 GSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADE----------TQFWQ 229

Query: 235 AYVDDVAANRQIEIKTLTPSMEQFVAQLKEVNGD 268
             +D               +  QF+A +K+  GD
Sbjct: 230 GVLD--------------TTHRQFIASVKQGRGD 249