Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., signal peptide peptidase SppA, 67K type (RefSeq) from Shewanella loihica PV-4

 Score =  496 bits (1278), Expect = e-145
 Identities = 266/607 (43%), Positives = 394/607 (64%), Gaps = 10/607 (1%)

Query: 11  ILKGIWKAITFIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQS 70
           I   +WK +   R  + NL F   I +++ I    ++P  T+++ SALVL+LSG +VEQ 
Sbjct: 11  IFSTLWKVVNTTRKVILNLFFFGFIALLFVILAGEESP--TVEEGSALVLDLSGNVVEQK 68

Query: 71  THINPMDSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRY 130
             ++P+++   S  G +   E +L D++  + +A +D  ++ LVL +G +  T ++KL+ 
Sbjct: 69  RQVDPIEAAMKSGKGGQSDGEILLADLLNAIDNAASDKRISALVLDIGHLRWTGISKLQS 128

Query: 131 IAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLL 190
           I  A+  FKASGKP+ A+G++Y Q+QY+LAS+AD IYL P G+V ++G S Y  Y+K+ L
Sbjct: 129 IGDALTRFKASGKPIIAMGNWYGQNQYFLASFADTIYLNPQGSVEIEGLSRYRQYFKSAL 188

Query: 191 EKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKT 250
           +KL +  HVFRVGT+KSA+EPF+RDDMS+AA+ +    L  +W ++   V+ NR I+   
Sbjct: 189 DKLKIKAHVFRVGTFKSAVEPFMRDDMSEAAKSANRELLQDIWDSFEATVSENRGIKQDD 248

Query: 251 LTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETFGSDGKD-SYNAIGY 309
           L  S E+++ +L + NG  + ++  +G VD+LA+ +Q R  + E  G   +  S+  I +
Sbjct: 249 LMLSAERYLTELNKANGRSSEMAINLGWVDKLASAEQFRLDMVERVGEAKEGHSFKQISF 308

Query: 310 YEYKTTIK---PTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 366
           Y+Y++ I+   P  + DA  + ++VA G I++G Q  G +GG++ + LLR+AR D  VKA
Sbjct: 309 YDYQSVIQQFPPVLMHDA--VGIIVAKGNILNGHQAAGQIGGESTSALLRKARFDDKVKA 366

Query: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426
           VVLRVDSPGGSAFASE IR E+ ALKAA KPVVVSM + AASGGYWIS SAD I A PTT
Sbjct: 367 VVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGTYAASGGYWISASADYIYATPTT 426

Query: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDAIQLGIEHGYQR 486
           LTGSIGIF ++TTFE  L  LGI+TDGV T+ ++    T G++   K+ IQ  IE GYQ 
Sbjct: 427 LTGSIGIFGMMTTFEDSLAELGIHTDGVSTSGWTAFSSTQGISDELKEIIQRHIERGYQD 486

Query: 487 FISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNL 546
           FISLV+E+RG+  + VD++AQGRVW+ + A  LGLVD+LGD + AV  AA+LA+L++++ 
Sbjct: 487 FISLVSEERGMKPEEVDKIAQGRVWSGKRALELGLVDELGDLEQAVTKAAELAKLEKFDT 546

Query: 547 YWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPKSLQPLAVEWQQQTSLLNQLNDPKGQ 606
             +E+ L+P +QF+Q +  Q    +   +S      ++ L  E        N  +DP G 
Sbjct: 547 KLIEQELSPQEQFIQQMFAQAVSYMPQSLSQ--SSLIEQLLGEVSSVVEEFNAFDDPNGI 604

Query: 607 YAFCLPC 613
           Y +C  C
Sbjct: 605 YLYCDSC 611