Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., ClpP class periplasmic serine protease from Dechlorosoma suillum PS

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 321 LTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFA 380
           L D    A+V   G I D S   G    D +   LR A  D     V+LR++SPGGS   
Sbjct: 71  LADGRHTALVQLKGVI-DSS---GEASADKINSALRSAFEDKGTAGVILRINSPGGSPVQ 126

Query: 381 SEVIRNEIEALKAAGK----PVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSV 436
           S +I +EI  L+  GK    P+ V +  + ASGGY+++ +ADKI     +L GSIG+   
Sbjct: 127 SGIINDEIRRLR--GKYPDIPLYVVVEDVCASGGYYVAAAADKIFVDKASLVGSIGVLMD 184

Query: 437 ITTFEKGLNNLGI----YTDGVG---TTPFSGQGLTTGLTQGAKDAIQLGIEHGYQRFIS 489
              F   ++ LG+     T G       PFS Q          K   Q  +   +++FI 
Sbjct: 185 GFGFTGTMDKLGVERRLLTAGENKGFLDPFSPQ------DPKQKLMAQTMLGEIHKQFID 238

Query: 490 LVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWV 549
           +V + RG  LK   ++  G VWT   +  LGL D   DF     +A D+ + ++   Y  
Sbjct: 239 VVKKGRGQRLKETPDMFSGLVWTGARSIELGLAD---DFGTVSSVARDVIKAEKVMDYTQ 295

Query: 550 EEPLTP--AQQFLQDLLGQVRVSLG 572
           +E +    A++F  D++     +LG
Sbjct: 296 KENIAERFAKRFGADMVQGAVKALG 320



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 19/218 (8%)

Query: 97  IVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPV---FAVGDFYN 153
           I   LR A  D    G++L +   P  +  +   I   I   +     +     V D   
Sbjct: 97  INSALRSAFEDKGTAGVILRINS-PGGSPVQSGIINDEIRRLRGKYPDIPLYVVVEDVCA 155

Query: 154 QSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFV 213
              YY+A+ ADKI++     V   G       +   ++KL V   +   G  K  ++PF 
Sbjct: 156 SGGYYVAAAADKIFVDKASLVGSIGVLMDGFGFTGTMDKLGVERRLLTAGENKGFLDPFS 215

Query: 214 RDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSM---------EQFVAQLKE 264
             D     +  A   L ++   ++D V   R   +K  TP M               L +
Sbjct: 216 PQDPKQ--KLMAQTMLGEIHKQFIDVVKKGRGQRLKE-TPDMFSGLVWTGARSIELGLAD 272

Query: 265 VNGDLAALSK---KVGLVDELATRQQVRQTLAETFGSD 299
             G ++++++   K   V +   ++ + +  A+ FG+D
Sbjct: 273 DFGTVSSVARDVIKAEKVMDYTQKENIAERFAKRFGAD 310