Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., signal peptide peptidase SppA from Methanococcus maripaludis JJ

 Score =  112 bits (281), Expect = 2e-29
 Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 7/237 (2%)

Query: 324 ANDIAVVVASGAIMDGSQPRGTV-----GGDTVAGLLREARNDSNVKAVVLRVDSPGGSA 378
           + +IA++   G I   S   G       G +     L +A N+ N+KAV+++++SPGG A
Sbjct: 33  SKNIALINIDGTITLESSDSGLFSSIQPGVNDYVEWLDDAENNDNIKAVIIKINSPGGGA 92

Query: 379 FASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVIT 438
            ASE +  +I+ +    KPVV  + ++ AS  Y  + S + IVA+   + GSIG+   + 
Sbjct: 93  VASEKLSRKIKEVSEK-KPVVAYIENMGASAAYQAASSTNYIVAERQAVVGSIGVRMELI 151

Query: 439 TFEKGLNNLGIYTDGVGTTPFSGQGLTT-GLTQGAKDAIQLGIEHGYQRFISLVAEKRGL 497
            +   +  LGI T  +    +   G  T  +T+     ++  +   Y  F+S VAE R +
Sbjct: 152 HYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEEYAMLESMVNESYYEFVSWVAENRNM 211

Query: 498 TLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLT 554
           T+    E+A G++++   AQ +GLVD  G  DDAV +A  L  +   ++Y   E  T
Sbjct: 212 TINETLEVADGKIYSGTQAQKVGLVDMTGTEDDAVDMAVKLGNITNPDIYEYGETST 268



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 30/269 (11%)

Query: 17  KAITFIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPM 76
           K I +  +A+  +I +L +G++  ++V +D     +   +  ++N+ G I         +
Sbjct: 2   KKIYYYSIAVFLIIAILMVGLL--VFVSSDG----ISSKNIALINIDGTIT--------L 47

Query: 77  DSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAIN 136
           +S    +F    P  N   D VE L  A+N++N+  +++ +   P         +++ I 
Sbjct: 48  ESSDSGLFSSIQPGVN---DYVEWLDDAENNDNIKAVIIKINS-PGGGAVASEKLSRKIK 103

Query: 137 EFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDV 195
           E     KPV A  +    S  Y A+ +    +A   AV+   G     ++Y  L+EKL +
Sbjct: 104 EVSEK-KPVVAYIENMGASAAYQAASSTNYIVAERQAVVGSIGVRMELIHYYGLMEKLGI 162

Query: 196 TTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSM 255
            T     G YK    P     M++         + + +  +V  VA NR +   T+  ++
Sbjct: 163 NTTSITGGKYKDIGTP--TRSMTEEEYAMLESMVNESYYEFVSWVAENRNM---TINETL 217

Query: 256 EQFVAQLKEVNGDLAALSKKVGLVDELAT 284
           E  VA  K  +G  A   +KVGLVD   T
Sbjct: 218 E--VADGKIYSGTQA---QKVGLVDMTGT 241