Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., capsid protein of prophage from Marinobacter adhaerens HP15

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 28/278 (10%)

Query: 269 LAALSKKVGLVDELATRQQVRQTLAETFGSDGKDSYNAIGYYEYKTTIKPTTLTDANDIA 328
           +A+L  + GL++     Q+  +  A++FGSD             +   +P  +   N IA
Sbjct: 35  VASLQDEFGLIES----QEKLRMRADSFGSD-------------RPRNRPYEVL--NGIA 75

Query: 329 VVVASGAIMDGS---QP-RGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVI 384
           ++  +G ++      QP  G  G D +   + EA  D  V  ++L +D+PGG        
Sbjct: 76  LIPVAGTLVHKFGHLQPYSGMTGYDGIIARVEEALADPTVNGILLDMDTPGGEVAGCFDT 135

Query: 385 RNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGL 444
              +  L+   KP+      +A S G  +  + D      +  TGS+G+  +  +FE+ L
Sbjct: 136 ARRLNELRGQ-KPIASISYDMACSAGMALHSATDYRYTTTSARTGSVGVVMMHASFEEQL 194

Query: 445 NNLGIYTDGVGTTPFSGQGLT-TGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVD 503
              GI    + +  F   G     L +      Q   +     F  +VA   GL+  A D
Sbjct: 195 KANGIDVTLIHSGAFKVDGNPYENLPEQVLARFQAESDRLRNEFADMVATHIGLS--ASD 252

Query: 504 ELA-QGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQ 540
            LA +  ++T QDA   G  D+L +  D +   +D  Q
Sbjct: 253 VLATEAAIYTGQDAIEAGFADELINGHDMLAAFSDYIQ 290