Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., signal peptide peptidase SppA, 67K type (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  516 bits (1330), Expect = e-151
 Identities = 278/605 (45%), Positives = 391/605 (64%), Gaps = 10/605 (1%)

Query: 15  IWKAITFIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHIN 74
           IW  +   R  + NLIF   + +I  I + +   +   D +SALVLNL+G IV+Q   ++
Sbjct: 15  IWNVLNGTRKLILNLIFFGFLALI-LIAIGSSEDIKVED-NSALVLNLAGSIVDQKQQVD 72

Query: 75  PMDSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKA 134
           P+++            E +L DI+  + +A +DN ++ +VL L ++    ++KL+ I  A
Sbjct: 73  PIEAALKQGNNGSSDGEILLADIIYVIDNATHDNRISTIVLDLAELKRAGISKLQSIGDA 132

Query: 135 INEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLD 194
           +N FK SGK V A+G++Y Q+QY+LAS+A  IYL P G+V L G S Y+ Y+K+ LEKL 
Sbjct: 133 LNRFKESGKKVVAIGNYYEQNQYFLASFATTIYLNPQGSVSLDGLSMYNQYFKSALEKLK 192

Query: 195 VTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPS 254
           +  H+FRVGT+KSA+EP++RDDMSDAARE++S  L  +W +Y   VA NRQI+   L   
Sbjct: 193 IKAHIFRVGTFKSAVEPYMRDDMSDAAREASSALLADIWQSYTQTVAKNRQIDANALVLD 252

Query: 255 MEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETFGSDGK-DSYNAIGYYEYK 313
              ++AQL +  GD A ++  +  VD LAT ++ R+ + +  G +   DS+  + +Y+Y 
Sbjct: 253 SPSYLAQLDKAEGDSATMALNMKWVDTLATDEEFRKIMLDAVGKENNGDSFKQVSFYDYL 312

Query: 314 TTIKPT-TLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVD 372
           T + P  +  + + + ++VASG I++GSQP G +GGD+ A LLR+AR D ++KA+VLRVD
Sbjct: 313 TLVTPLPSFIEQDSVGIIVASGTILNGSQPAGQIGGDSTADLLRKARFDKHIKALVLRVD 372

Query: 373 SPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIG 432
           SPGGSAFASE IR E+ ALKAAGKPVVVSM SLAASGGYWIS SAD I A PTTLTGSIG
Sbjct: 373 SPGGSAFASEQIRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIG 432

Query: 433 IFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDAIQLGIEHGYQRFISLVA 492
           IF +ITTFE  L +LGI+TDGV T+ ++G  +T  L+   +  IQ  IE GY  FISLVA
Sbjct: 433 IFGMITTFEDSLASLGIHTDGVSTSEWAGLSVTRTLSPQIESVIQRHIERGYLDFISLVA 492

Query: 493 EKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEP 552
           ++R ++L+ VD++AQGRVW+ + A  LGLVD+LGD D AV  AA LA L  ++   +E+ 
Sbjct: 493 KERKISLEQVDKIAQGRVWSGKKALELGLVDELGDIDQAVTKAAQLANLSLFDTRLIEQE 552

Query: 553 LTPAQQFLQDLLGQVRVSL--GLDVSTLLPKSLQPLAVEWQQQTSLLNQLNDPKGQYAFC 610
           LTP Q+F+Q +   V   L   L  STLL + L     +W      +   NDP   Y +C
Sbjct: 553 LTPEQRFVQQMFASVSAYLPASLSHSTLLEQMLN----QWTGSLKTIAAFNDPNHVYVYC 608

Query: 611 LPCQV 615
             C +
Sbjct: 609 DSCVI 613