Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., minor capsid protein C (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.1 bits (157), Expect = 6e-15
 Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 4/201 (1%)

Query: 349 DTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAG-KPVVVSMSSLAA 407
           D +   +  A  D  V+A++L V SPGG+    + + + I A +A G KP+    + L A
Sbjct: 99  DQIRPAIASALADRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMA 158

Query: 408 SGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTT 466
           S  Y I  +  +++A  T   GSIG+ SV   + K     G+    +    +   G   T
Sbjct: 159 SAAYMIGSATGRVLAPATATVGSIGVISVYENWSKWNEKAGLSYAYLTAGQWKAVGNPDT 218

Query: 467 GLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQL- 525
            L    +  +Q  +   Y+ F   V+   GL    +   A G+V+ A +A   GLV  + 
Sbjct: 219 PLADNERAYLQERLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAIV 277

Query: 526 GDFDDAVHLAADLAQLDQYNL 546
            D + A+   A    +D+ NL
Sbjct: 278 ADREAAIATLAKEMTMDRANL 298