Pairwise Alignments

Query, 666 a.a., NADPH-dependent 2,4-dienoyl-CoA reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., NADH:flavin oxidoreductase/NADH oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  838 bits (2165), Expect = 0.0
 Identities = 428/670 (63%), Positives = 515/670 (76%), Gaps = 6/670 (0%)

Query: 2   YPNLFQPLDLGFTQLKNRVLMGSMHTGLEENKEGLHKLAAFYEERAKGGVGLIVTGGFSP 61
           +P+L +PLDLGFTQLKNRVLMGSMHTGLEE K G  KLAAFY ERA GGVGLIVTGG SP
Sbjct: 3   FPHLLKPLDLGFTQLKNRVLMGSMHTGLEEEKGGFEKLAAFYRERAAGGVGLIVTGGISP 62

Query: 62  NLRGRLHPFSAEFSKTKHAKAHKVVTEAVHRHGAKIALQLLHAGRYAMHPFSQSASAIRA 121
           NLRGRL P +++ S     K H++VT+AVH  G KI +Q+LHAGRY  HPFS + SA++A
Sbjct: 63  NLRGRLAPHASQLSFPWQVKRHRIVTDAVHGAGGKICMQILHAGRYGYHPFSLAPSALKA 122

Query: 122 PIAKFAPSEMSTRQIRNTIQDFANSAELAQLAGYDGVEVMGSEGYLINQFICKRTNMRYD 181
           PI  F PS MS RQIR+TI+D+A SA+LA+ AGYDGVEVMGSEGYLINQFIC RTN R D
Sbjct: 123 PITPFKPSAMSARQIRSTIKDYATSAKLARKAGYDGVEVMGSEGYLINQFICSRTNKRQD 182

Query: 182 EWGGSYQNRIRFPVEIVKAIREAVGKEFIIIFRLSMLDLVEQGSTFEEVVVLAKALEEAG 241
           EWGGS++NR RFP+EIV+AIR AVG +FIIIFRLSMLDLVE+GS+++EVV LAK LEEAG
Sbjct: 183 EWGGSFENRSRFPLEIVRAIRAAVGSDFIIIFRLSMLDLVEEGSSWDEVVALAKGLEEAG 242

Query: 242 VTIINTGIGWHEARIPTIATQVPRAAFSWVTEKIKPYLKVPVVTCNRINTPEQAEKILAS 301
           VTIINTGIGWHEARIPTIAT VPR AF+WVTE++K  + +P++  NRINTPE AE+ILAS
Sbjct: 243 VTIINTGIGWHEARIPTIATSVPRGAFAWVTERLKQEVHIPLIATNRINTPEIAEQILAS 302

Query: 302 GQADMVSMARPFLADADFVRKAQEGQSALINTCIGCNQACLDNVFRGKRASCLVNPRACY 361
           GQADMVSMARPFLAD DFV KA  GQS LINTCIGCNQACLD+ F+ KRA+CLVNPRACY
Sbjct: 303 GQADMVSMARPFLADPDFVNKAAAGQSELINTCIGCNQACLDHTFKMKRATCLVNPRACY 362

Query: 362 ETEI-VVKPAQSKKIAVVGAGPAGLAFATTASERGHQVDLFERNDRIGGQFRLAMQIPGK 420
           ETEI   K +Q KKIAV+GAGPAG+AF+  A+ RGH V LFE    +GGQF LA +IPGK
Sbjct: 363 ETEINFPKTSQPKKIAVMGAGPAGMAFSIYAASRGHNVVLFEAKGEVGGQFNLARKIPGK 422

Query: 421 EEFRETIRYFANRIDQTGVKLHLGCEVQFSDL--RGYDEVVIATGVTPRKIALAGLSESS 478
           EEF ETIRYF N++ QTGV+L L   +  S L    +DEVVIA GV PR + L G  +S 
Sbjct: 423 EEFDETIRYFNNQMRQTGVELRLNTRLDASVLNDEDFDEVVIAAGVVPRAVKLPGF-DSP 481

Query: 479 KVVDYQTLIREKTPVGQKVAIVGAGGIGVDVASMLTEPKDQTLDD--WLYEWGIDKAIEH 536
           +VV+YQ ++  +  VGQKVA++GAGGIG D+A  L E    TLD   W  +WGID A E 
Sbjct: 482 RVVNYQQVLNGEVRVGQKVALIGAGGIGFDMAHYLGEKDSTTLDPKRWRDQWGIDDAYEA 541

Query: 537 PGGLYPYPETTSEREVWLLQRRKGAVGKGPGKTTGWIHKRTLEKRGVHLVGGVQYQKIDE 596
            GGL    +  +ER ++LLQR+   +GKG GKTTGWIH+   +  GV  + GV Y+  DE
Sbjct: 542 RGGLKAPIKEPAERTIYLLQRKTTPMGKGLGKTTGWIHRTVAKMHGVVQMNGVSYESFDE 601

Query: 597 QGLHIERDGKSELIDADSVVICAGQESVRPFEAQWAELGDKLHVIGGADVAGELDAARAI 656
           QGLHI  + +++++D ++V++CAGQES R   A+    G  +H+IGG DVA ELDA RAI
Sbjct: 602 QGLHIRVNEETKVLDVNTVILCAGQESNRSLVAEMEATGKPVHLIGGVDVAAELDAKRAI 661

Query: 657 RQGVELAVRL 666
           RQG ELA+R+
Sbjct: 662 RQGAELAMRI 671