Pairwise Alignments

Query, 666 a.a., NADPH-dependent 2,4-dienoyl-CoA reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., oxidoreductase, FMN-binding (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  131 bits (329), Expect = 6e-35
 Identities = 108/356 (30%), Positives = 167/356 (46%), Gaps = 48/356 (13%)

Query: 1   MYPNLFQPLDLGFTQLKNRVLMGSMHTGLEENKEGL--HKLAAFYEERAKGGVGLIVTGG 58
           M  +LFQP+ LG   LKNR++M  M          +  H +A +Y +RA  G  LIV+ G
Sbjct: 1   MTQSLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAG--LIVSEG 58

Query: 59  --FSPNLRGRLHPFSAEFSKTKHAKAHKVVTEAVHRHGAKIALQLLHAGRYAMHPFSQ-- 114
              SP  +G  + ++      +     ++VTEAVH  G  I  QL H GR   HP +   
Sbjct: 59  TQISPTAKG--YAWTPGIYTPEQIAGWRIVTEAVHAKGCAIFAQLWHVGRVT-HPDNIDG 115

Query: 115 ----SASAIRAPIAKF---------------APSEMSTRQIRNTIQDFANSAELAQLAGY 155
               S+S ++A   K                 P  M+   I   I D+  +A  A  AG+
Sbjct: 116 QQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNAMEAGF 175

Query: 156 DGVEVMGSEGYLINQFICKRTNMRYDEWGGSYQNRIRFPVEIVKAIREAVGKEFIIIFRL 215
           DG+E+  + GYLINQFI    N R DE+GGS +NR+RF  E+V A+ +A+G E + + RL
Sbjct: 176 DGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGV-RL 234

Query: 216 SMLDLVEQGSTFEEVVVLAKA---LEEAGVTIINTG-IGWHEA-RIPTIATQVPRAAFSW 270
           + L  +      + ++    A   L +  +  ++   + W +A   P    +  R A+  
Sbjct: 235 APLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQG 294

Query: 271 VTEKIKPYLKVPVVTCNRINTPEQAEKILASGQADMVSMARPFLADADFVRKAQEG 326
           V           ++   R N  E+AE+ +  G ADM+   RPF+A+ D   + + G
Sbjct: 295 V-----------LIYAGRYNA-EKAEQAINDGLADMIGFGRPFIANPDLPERLRHG 338