Pairwise Alignments

Query, 666 a.a., NADPH-dependent 2,4-dienoyl-CoA reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., 2,4-dienoyl-CoA reductase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  806 bits (2081), Expect = 0.0
 Identities = 411/671 (61%), Positives = 504/671 (75%), Gaps = 7/671 (1%)

Query: 2   YPNLFQPLDLGFTQLKNRVLMGSMHTGLEENKEGLHKLAAFYEERAKGGVGLIVTGGFSP 61
           +P+L +PLDLGFTQLKNRVLMGSMHTGLEE K G  KLAAFY+ERA GGVGLIVTGG SP
Sbjct: 3   FPHLLEPLDLGFTQLKNRVLMGSMHTGLEEEKGGFEKLAAFYKERALGGVGLIVTGGISP 62

Query: 62  NLRGRLHPFSAEFSKTKHAKAHKVVTEAVHRHGAKIALQLLHAGRYAMHPFSQSASAIRA 121
           NLRGRL P + + S       H++VT+AVH  G KI +Q+LHAGRY  HPFSQ+ S I++
Sbjct: 63  NLRGRLTPHACQLSFPWQVGKHRIVTQAVHEAGGKICMQILHAGRYGYHPFSQAPSKIKS 122

Query: 122 PIAKFAPSEMSTRQIRNTIQDFANSAELAQLAGYDGVEVMGSEGYLINQFICKRTNMRYD 181
           PI  F PS MS+RQ+R TI+D+A+SA LA+ AGYDGVEVMGSEGYLINQFI  RTN R D
Sbjct: 123 PITPFTPSAMSSRQVRGTIKDYASSAALAKRAGYDGVEVMGSEGYLINQFISSRTNTRTD 182

Query: 182 EWGGSYQNRIRFPVEIVKAIREAVGKEFIIIFRLSMLDLVEQGSTFEEVVVLAKALEEAG 241
           EWGGS++ R +FP+EIV AIR  VGK+FIIIFRLSMLDLV+ GST++EVV LAK LE AG
Sbjct: 183 EWGGSFEKRAQFPIEIVNAIRAKVGKDFIIIFRLSMLDLVDNGSTWDEVVQLAKWLEHAG 242

Query: 242 VTIINTGIGWHEARIPTIATQVPRAAFSWVTEKIKPYLKVPVVTCNRINTPEQAEKILAS 301
           V+IINTGIGWHEAR+PTIAT VPR AF+WVT+K+K  + VP++  NRINTPE  E+I+AS
Sbjct: 243 VSIINTGIGWHEARVPTIATSVPRGAFAWVTQKLKQSVAVPLIATNRINTPEIGEQIIAS 302

Query: 302 GQADMVSMARPFLADADFVRKAQEGQSALINTCIGCNQACLDNVFRGKRASCLVNPRACY 361
           GQADMVSMARPFLAD +FV KA      LINTCIGCNQACLD+ F  KRA+CLVNPRACY
Sbjct: 303 GQADMVSMARPFLADPEFVNKAAANTPELINTCIGCNQACLDHTFSLKRATCLVNPRACY 362

Query: 362 ETEIVVKPAQSKK-IAVVGAGPAGLAFATTASERGHQVDLFERNDRIGGQFRLAMQIPGK 420
           ETEI   P   KK IAV+GAGPAG+AF+  A+ RGH+V LFE    +GGQF LA +IPGK
Sbjct: 363 ETEINFLPTSKKKRIAVMGAGPAGMAFSVYAAMRGHEVVLFEAKSEVGGQFNLARKIPGK 422

Query: 421 EEFRETIRYFANRI--DQTGVKLHLGCEVQFSDLRGYDEVVIATGVTPRKIALAGLSESS 478
           EEF ETIRYF N+I   +  ++L+   + +  +   +DE+VIA+GV PR+++L G  +S 
Sbjct: 423 EEFNETIRYFLNQIKLHKIDLRLNTRLDAKVLETEKFDEIVIASGVVPRELSLPGF-DSP 481

Query: 479 KVVDYQTLIREKTPVGQKVAIVGAGGIGVDVASMLTEPKDQTL--DDWLYEWGIDKAIEH 536
           KVVDYQ ++  +  VG KVA++GAGGIG D+A  L E +  TL  D WL +WGIDK  +H
Sbjct: 482 KVVDYQQVLTGQALVGGKVALIGAGGIGFDMAHYLCESESSTLNPDKWLKQWGIDKQYQH 541

Query: 537 PGGL-YPYPETTSEREVWLLQRRKGAVGKGPGKTTGWIHKRTLEKRGVHLVGGVQYQKID 595
            GGL  P  E T  R+V+LLQR+   +G+G GKTTGWIH+  L++  V +  GV Y+K D
Sbjct: 542 AGGLTQPEVENTDHRQVYLLQRKTSKMGQGLGKTTGWIHRLVLKQHDVKMKMGVSYEKFD 601

Query: 596 EQGLHIERDGKSELIDADSVVICAGQESVRPFEAQWAELGDKLHVIGGADVAGELDAARA 655
           + GLHI    + E++  D+V++CAGQES R    +    G  +H+IGG DVA ELDA RA
Sbjct: 602 DAGLHIRVGEQVEVLAVDNVILCAGQESNRTLVDEMKASGIPVHLIGGVDVAAELDAKRA 661

Query: 656 IRQGVELAVRL 666
           IRQG ELA+RL
Sbjct: 662 IRQGAELAMRL 672