Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., DinG family ATP-dependent helicase CPE1197 from Pseudomonas fluorescens FW300-N2E2

 Score = 65.1 bits (157), Expect = 1e-14
 Identities = 135/636 (21%), Positives = 222/636 (34%), Gaps = 115/636 (18%)

Query: 10  GALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGKKVII 69
           GA   A P    R  Q  +A++V  A++    L+ +A TG GKT   L P L        
Sbjct: 176 GAHTLAFPHASFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFPML-------- 227

Query: 70  STGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPESDPTL 129
               K L  Q   +           F   A   GR   L LD  + Q++    P     +
Sbjct: 228 ----KALAPQRLDK----------VFFLTAKTPGRK--LALD--AAQVITRSAPSMPLRV 269

Query: 130 LTQLVKVRSWASSTQSGDLGEC-------DDLAEDSPIIPTITSTNDNCLGKECASYQDC 182
           L  + + ++     ++     C       D L         +T  +   L +   +++ C
Sbjct: 270 LEMIARDKACEHPDKACHGESCPLARGFYDRLPGARAAASQVTLLDQAALREIALAHEVC 329

Query: 183 FVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFG 242
               ++  A  ADVVV +++ +  D +    G  +        + DEAH L +   Q + 
Sbjct: 330 PYYLSQEMARWADVVVADYNYYF-DFSALLFGLAQANGWTVATLVDEAHNLVERGRQMYS 388

Query: 243 Q--------SVSSRQVQDLAKDIELGYRT-------EAKDMRQLQKVSDKLVQAAMDLRI 287
                    SV     + L K ++   R        +    R  +K+ DKL+QA      
Sbjct: 389 ATLDQATLTSVRKTAPEPLKKSLDRVNRQWNALHAPQVAAYRAYEKLPDKLLQALATCTT 448

Query: 288 VLGE----------PGYRGNWREVLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDT 337
            +G+           G +  + + L+   VA   +       F  D+ K  LGR + L T
Sbjct: 449 AIGDYLNDHPQGLDSGLQAFYFDALQFGRVAETFDE-----HFLFDIHKRELGRQRSLST 503

Query: 338 AFERATLILGRIRRVCDVSVTGYSYWYDTTPRHFSLHITPLSVADKFREQIALKEGAWIF 397
              R  +    +R     + +   +    +PRH+                          
Sbjct: 504 LCLRNVVPAAFLRPRLTAARSTVLFSATLSPRHY-------------------------- 537

Query: 398 TSATLAVNEDFSHFTERLGLTP--SAQFSLVSPFDYQQQAVLCVPRYLPE-PNSSGLAEK 454
                        + + LG TP  +    + SPF  +Q  V  V R      +     E 
Sbjct: 538 -------------YADLLG-TPGDTVWIDVESPFKAEQLDVQVVSRISTRFAHRQASLEP 583

Query: 455 LVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTLPVLM-----QGETSKQKTLAE 509
           +  ++A       G      +S   ++ +   F ER     L       GE  +Q  L  
Sbjct: 584 IAALMARQFNERPGNYLAFFSSFDYLQQVAGLFAERYPQIALWTQSRGMGEAPRQAFLER 643

Query: 510 FME--LGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKARIEDCRLRGGDP 567
           FME   G    V  GAF EGID+ G  L    I  L   A  +P+ +   +      GD 
Sbjct: 644 FMEHSQGIGFAVLGGAFGEGIDLPGSRLIGAFIATLGL-AQFNPVNEQMKQRMAAIFGDG 702

Query: 568 FAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNR 603
           +    L   +  + Q  GR+IR + D+G +++ D+R
Sbjct: 703 YDYTYLYPGLQKVVQAAGRVIRTQQDRGVVMLIDDR 738