Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (377), Expect = 3e-40
 Identities = 85/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 371 FSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLT---PSAQFSLVS 427
           +  +++P+ V       +  K    +  SATL    +F+HFT ++GL+    S   ++ S
Sbjct: 430 YLFNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDS 489

Query: 428 PFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERF 487
           PFD+QQ A L +P+   EP      ++L   +  +I+        L  S+  M  + +  
Sbjct: 490 PFDFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMAT-LVLFASYWQMEKVADLV 548

Query: 488 RERLTLPVLMQGETSKQKTLAEFMELGN----ALLVATGAFWEGIDVRGDTLSCVIIDKL 543
           R ++  P+L+QGE S+Q+ L +  +  +    +++  TG+F EG+D+ GD L+ +II KL
Sbjct: 549 RSKIKSPLLIQGEASRQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKL 608

Query: 544 PFTAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNR 603
           PF  P  P+ +A  E  + +GG+PF Q+ +P+A   L Q  GRL+R + D G + I D R
Sbjct: 609 PFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRR 668

Query: 604 LVTRDYGGVFLASLPP 619
           LVT+ YG   L +LPP
Sbjct: 669 LVTKRYGKSLLDALPP 684



 Score =  106 bits (264), Expect = 4e-27
 Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 35/284 (12%)

Query: 12  LGQAIPGFQPRQAQVDMAKAVASAIANQSQ-----LVVEAGTGTGKTFAYLVP----ALL 62
           +  A+P F+ R+ Q  +   ++  +A +       +VVEAGTG GK+ AY++     AL 
Sbjct: 17  IAAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLAYILGSIPLALA 76

Query: 63  SGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRL--------- 113
           S KKV I+T +  LQEQL ++DLP      G      L+KGR  Y+CL +L         
Sbjct: 77  SKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFGLVKGRQRYVCLSKLEMLIGGDDG 136

Query: 114 -SRQMVESHTPESDPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSP--IIPTITSTNDN 170
               M ++    +   LL  L+K        +    GE D L++  P  +   I     +
Sbjct: 137 TQMAMWQTKPDHNQVELLQGLLK-----DFHEGRWNGERDTLSQQLPDHLWQQIACDKHS 191

Query: 171 CLGKECASYQDCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAE--VFIFD 228
           C  ++ AS++ C   KAR      DV++ NH L  ADL   E G G ++P+ E   ++ D
Sbjct: 192 C-HRQLASHRHCPFHKAREDVDTWDVLIANHSLLFADL---ELGGGVILPDPEELYYVID 247

Query: 229 EAHQLPDIASQYFGQSVSSRQVQDLAKDIELGYRTEAKDMRQLQ 272
           EAH LP +A  +     + R   D  + +    +T AK   QL+
Sbjct: 248 EAHHLPIVARDFSSAQATLRGAIDWLEKVG---KTSAKLQNQLK 288