Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., Probable ATP-dependent helicase DinG from Mycobacterium tuberculosis H37Rv

 Score =  272 bits (696), Expect = 3e-77
 Identities = 223/667 (33%), Positives = 313/667 (46%), Gaps = 63/667 (9%)

Query: 11  ALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSG----KK 66
           A+  A  G   R+ Q +MA AVA A      LVV+AGTGTGK+ AYLVPA++        
Sbjct: 14  AIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAP 73

Query: 67  VIISTGSKNLQEQLFHRDLPLMV----SALGFFGQVALLKGRANYLCLDRLSRQMVES-H 121
           V++ST +  LQ QL  RDLP +V    +AL    + ALLKGR NYLCL+++   +  S H
Sbjct: 74  VVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTASDH 133

Query: 122 TPES------DPTLLTQL----VKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNC 171
             E       DP  +T L     ++ +WAS+T SGD  +      D        S  + C
Sbjct: 134 DDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARE-C 192

Query: 172 LG-KECASYQDCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEA 230
           LG   C    +CF  +AR  A  ADVVV NH L    LAI       ++PE  + + DEA
Sbjct: 193 LGVARCPFGSECFSERARGAAGLADVVVTNHAL----LAIDAVAESAVLPEHRLLVVDEA 248

Query: 231 HQLPDIASQYFGQSVSSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLG 290
           H+L D  +      ++S  +   A+ I      + K  ++LQ  S     A  D R    
Sbjct: 249 HELADRVTSVAAAELTSATLGMAARRITR--LVDPKVTQRLQAASATFSSAIHDAR---- 302

Query: 291 EPGYRGNWREVLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATL--ILGR 348
            PG         ++  +  E+     AL+ A    + A+       TA  RA    +L  
Sbjct: 303 -PG---------RIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTE 352

Query: 349 IRRVCDVSVTGYS---------YWYDTTPRHFS----LHITPLSVADKFREQIALKEGAW 395
           I       +  ++          W +    H S    L + PLSVA+    Q+  +    
Sbjct: 353 ISDTASRILASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFAR-ATT 411

Query: 396 IFTSATLAVNEDFSHFTERLGLT---PSAQFSLVSPFDYQQQAVLCVPRYLPEP--NSSG 450
           + TSATL +   F       GLT   P     + SPF + +  +L V  +LP P  + SG
Sbjct: 412 VLTSATLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSG 471

Query: 451 LAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTLPVLMQGETSKQKTLAEF 510
            AE+L   +A +I    GR   L +S    R   E  RERL+ PVL QG+ S    + +F
Sbjct: 472 SAEQLTE-IAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKF 530

Query: 511 MELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKARIEDCRLRGGDPFAQ 570
                  L  T + W+G+DV G +LS V+ID++PF  PDDPLL AR      RGG+ F  
Sbjct: 531 TADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMT 590

Query: 571 VQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYGGVFLASLPPIPRTRDLDVVT 630
           V    A + L QG GRL+R   D+G + + D+R+ T  YG    ASLPP  +T +   V 
Sbjct: 591 VAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVR 650

Query: 631 TFLQQLA 637
             L++LA
Sbjct: 651 AALRRLA 657