Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 765 a.a., Rad3-related DNA helicase from Marinobacter adhaerens HP15

 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 135/611 (22%), Positives = 223/611 (36%), Gaps = 77/611 (12%)

Query: 17  PGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGKKVIISTGSKNL 76
           P F+PRQ Q  +A+ V         L++EA TG GKT   L PAL++    + + G    
Sbjct: 181 PAFRPRQRQ--LAETVYKNSVKSGTLLLEAPTGLGKTLGTLFPALMA----MPAAG---- 230

Query: 77  QEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPESDPTLLTQLVKV 136
           Q++LF+                   +  A  L +D + R +  +   +  P    +LV  
Sbjct: 231 QDRLFY----------------LTCRNTARQLAMDAVGR-LRSAQAAQHWPLRTLELVSK 273

Query: 137 RSWASSTQSGDLGECDDLAED---------SPIIPTITSTNDNCLGKECASYQDCFVSKA 187
                       G+   LA+          +    +  + + + L K  A +  C    A
Sbjct: 274 DDACEHPDKACHGDSCPLAKGFFDRLPDARAEAAQSEGTLDQHALAKIAAGHDICPYFLA 333

Query: 188 RRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSVSS 247
           +  A  +DVV+ + +      A+      +   +A V + DEAH L D            
Sbjct: 334 QEMARWSDVVIGDVNRLFDQSALLHGLIRQNSWKASVLV-DEAHNLVD----------RG 382

Query: 248 RQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWREVLKVPTV 307
           R +  +  D +   R +    + L+   D+  +A   L            + E L    +
Sbjct: 383 RGMYSVRLDQQRLLRIKKTAPKPLKSAIDRTARAWQSLIRDCQADTQSPEFLETLPTQLL 442

Query: 308 AREVERLNEALQFALD-VLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGYSYWYDT 366
                 ++    +  D    LAL        AF +     G    +C+    G       
Sbjct: 443 GALQAMVSNLTDYLADNPPDLALQELLFESVAFIKLADSFGD-HSLCEFQRAGRG----- 496

Query: 367 TPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQF-SL 425
                SL I  L  AD  RE+        +F SATL+      ++ + LGL   ++F SL
Sbjct: 497 ---RASLTIQNLIPADFLRERFEAAHSVLLF-SATLSPGV---YYRDLLGLPEDSRFTSL 549

Query: 426 VSPFDYQQQAVLCVPRYLP-EPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLG 484
            SPF   Q  V   P     + +     + +  ++A       G      +S    +   
Sbjct: 550 PSPFSADQLRVQFTPGISTRQVHREASLKPIADLIARQFRDRPGHYLAFFSSFKYAKQAS 609

Query: 485 ERFRERLT-LPVLMQGETSKQKTLAEFM------ELGNALLVATGAFWEGIDVRGDTLSC 537
           +   E+   +P   Q      +  A+F+      E   A  V  G F EGID+ GD L  
Sbjct: 610 DALAEQAPDIPQRAQQPGMSPQQRADFLAGFRNPEGSVAFAVLGGVFSEGIDLPGDQLIG 669

Query: 538 VIIDKL---PFTAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDK 594
             +  L   PF A  + +LK R+E    R G  +    L   +  + Q  GR+IR   D+
Sbjct: 670 AFVATLGLPPFDAWHE-ILKVRLEK---RFGAGYDYTYLIPGLQKVAQAAGRVIRTPEDR 725

Query: 595 GALIICDNRLV 605
           G + + D+R +
Sbjct: 726 GVIWLIDDRFL 736