Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., helicase c2 from Marinobacter adhaerens HP15

 Score =  120 bits (302), Expect = 2e-31
 Identities = 89/274 (32%), Positives = 132/274 (48%), Gaps = 28/274 (10%)

Query: 40  SQLVVEAGTGTGKTFAYLVPAL----LSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFF 95
           S  VVEAGTGTGKT AYL+ A+      GK ++IST +  LQ+Q+  +DLP +       
Sbjct: 56  SACVVEAGTGTGKTLAYLIAAIPVAKALGKTLVISTATVALQDQIVLKDLPDLKRHSKMD 115

Query: 96  GQVALLKGRANYLCLDRLSRQMVESHTPESD--PTLLTQLVK-------------VRSWA 140
               L KGR  YLC+ RL  ++ +    +SD  P  L    K             + S+ 
Sbjct: 116 FNWTLAKGRGRYLCMSRLEARLHDEGNTDSDTMPLFLLDGPKNEEPGTRAFFEEMLASYG 175

Query: 141 SSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVSKARRRAMDADVVVVN 200
           S    GD     +   D  +   +T+ +  C  + C+ +  C    AR+   DAD+VV N
Sbjct: 176 SREWDGDRDHWPEQIPDD-VWRQVTTDHRQCTNRHCSYFDSCAFFDARKDLDDADIVVAN 234

Query: 201 HHLFLADLAIKETGFGELIPEAE--VFIFDEAHQLPDIASQYFGQSVSSRQVQDLAKDIE 258
           H L LADLA+   G G ++PE E  ++IFDEAH LPD A  +F  S+     +   K + 
Sbjct: 235 HDLVLADLAL---GGGAILPEPENALYIFDEAHHLPDKALNHFAASLPLNATRQWLKQLS 291

Query: 259 ---LGYRTEAKDMRQLQKVSDKLVQAAMDLRIVL 289
              +  +       Q  K  D++  A+ ++ +VL
Sbjct: 292 QALVKMQPYLAAGTQAAKSLDRISSASREVDLVL 325



 Score =  120 bits (302), Expect = 2e-31
 Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 6/232 (2%)

Query: 396 IFTSATLAVNEDFSHFTERLGLTPSAQFSLV-SPFDYQQQAVLCVPRYLPEPNSSGLAEK 454
           + TSATL     F     R GL   ++F +V S F Y + A + VP     P   G A++
Sbjct: 500 VLTSATLTALGRFDRLNARAGLPQGSRFLVVPSSFRYGEMATVEVPAMSAMPTDDGFADE 559

Query: 455 LVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTLPVLMQGETSKQKTLAEFM--- 511
           LV+ L P +   +     L TS   M  + +         ++ Q + +K + L +     
Sbjct: 560 LVKRL-PDLWAGEKATLVLFTSRRQMLQVRDALAPDYPDLIITQDDMAKGEVLRQHCSRV 618

Query: 512 -ELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKARIEDCRLRGGDPFAQ 570
            E   ++L    +F EGID+ G  L  V+I +LPF+ PDDP+  +  E    RGG+PF +
Sbjct: 619 DEGRPSVLFGVASFAEGIDLPGKYLHHVVITRLPFSVPDDPIEASLAEWVTQRGGNPFME 678

Query: 571 VQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYGGVFLASLPPIPR 622
           + +P+A I L Q VGRL+R + D G + I D R++ R YG + L +LPP  R
Sbjct: 679 ITVPDASIKLVQAVGRLLRTEQDTGRVTILDRRIIARRYGQLLLDALPPFRR 730