Pairwise Alignments

Query, 237 a.a., tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  208 bits (529), Expect = 9e-59
 Identities = 116/234 (49%), Positives = 152/234 (64%), Gaps = 11/234 (4%)

Query: 5   ILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDALAFG 64
           ILALDT TE CS AL      Y+    APR+H++++LPM+D +L +AG+++ +++ +A+G
Sbjct: 13  ILALDTCTEACSAALYAKGVTYADMADAPREHSQRLLPMIDGLLNDAGLSISDVNIIAYG 72

Query: 65  RGPGSFTGVRIGIGIAQGLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDARMEEV 124
           RGPGSFTG+RI   + QGLA G +LP+IGISTLAAMAQ A    G T V  AIDARM EV
Sbjct: 73  RGPGSFTGIRICTSMTQGLALGRELPVIGISTLAAMAQEAMEKSGETRVLCAIDARMAEV 132

Query: 125 YWGRYVRQEDGSWQVAEAECVIAPALLAQTLTQDDLTQDEQIWATAGTGWDAYPALADLP 184
           Y G Y R  DG   +   E V+ PA++  +         + +    GTG+DAYP L  L 
Sbjct: 133 YVGEY-RMHDGVATLVGEEAVLPPAMVKVS---------DGVRLACGTGFDAYPELLTLG 182

Query: 185 LQLQTS-EVLYPDAQDMAYLAQFELAQGNKVSVEQASPVYLRDTVAWKKLPGRE 237
             L+ S EV +P A+ M  LA+  +AQG   SV+  +PVYLRDTVAWKKLPGRE
Sbjct: 183 HGLELSTEVKFPAAEAMLTLAKQGIAQGLHTSVDDLAPVYLRDTVAWKKLPGRE 236