Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  575 bits (1481), Expect = e-168
 Identities = 280/556 (50%), Positives = 391/556 (70%), Gaps = 9/556 (1%)

Query: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64
           W  + P  VP  ++   Y S++E+FE+S  K+AD+PAF NMG  +T+ +LE  S AFA Y
Sbjct: 6   WNDKRPAGVPLDVDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSAAFAGY 65

Query: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124
           LQ    L  GDR+A+ MPN+LQYP+A+FG LRAG+I VN NPLYT RE+ HQ  D+ ARA
Sbjct: 66  LQAHTDLAPGDRIAVQMPNILQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125

Query: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184
           +V ++ F   +++++ +T +++++   +G ++P AKG +V+ +V  VK MVP Y LP AI
Sbjct: 126 LVYLNMFGQKVQEVLPDTDLQYLIEAKMGDLMPTAKGWLVNTMVSKVKKMVPAYSLPQAI 185

Query: 185 SMRKALHKGRRLQYVKPF-MSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYG 243
           S + AL  GR  Q +KP  +S +DIA LQYTGGTTG+AKGA+LTH N+VAN+ QA+   G
Sbjct: 186 SFKSALRLGRG-QGIKPLKVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQARACLG 244

Query: 244 -------PVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQ 296
                  P+L+EG+E+++  LPLYH++A T NC+  +  G  N+LITNPRDI GF+KEL+
Sbjct: 245 QLGDDGHPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFIKELK 304

Query: 297 KYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEG 356
            + F+ + G+NTLF AL+++ DF  LDF N+K+   GG A+ +A AERW++ TG  + EG
Sbjct: 305 NWRFSLLLGLNTLFVALMDHPDFKTLDFSNLKVTNSGGTALIKATAERWEQITGCGITEG 364

Query: 357 YGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQ 416
           YGLTE SP+ + NPY      G +G+PVP T +++++D G   P  + GEL ++GPQ+M+
Sbjct: 365 YGLTETSPVASANPYGGKSRLGTVGMPVPGTLMKVINDDGVEQPLGERGELCIKGPQIMK 424

Query: 417 GYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVA 476
           GYW +PEAT EVL+ EGW  +GDI   D  G + IVDRKKDMI+VSGFNVYPNEIEDVV 
Sbjct: 425 GYWNKPEATAEVLDHEGWFRSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIEDVVM 484

Query: 477 LHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDD 536
            H KV   A IG  ++ SGE VK++VV R+  ++ +E+ A+C+++ TGYK+PK +  RD 
Sbjct: 485 AHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTGYKIPKHIVLRDS 544

Query: 537 LPKTNVGKILRRVLRE 552
           LP T VGKILRR LR+
Sbjct: 545 LPMTPVGKILRRELRD 560