Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  605 bits (1559), Expect = e-177
 Identities = 296/558 (53%), Positives = 397/558 (71%), Gaps = 2/558 (0%)

Query: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64
           W  +YP  +   INPD+YP++  + +QS  ++A++PAF N+G  +T+ +L E S AFAAY
Sbjct: 6   WKDKYPAGIAADINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSGAFAAY 65

Query: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124
           LQ    L+ GDR+A+ +PN+LQYPVA+FG +RAG+I VN NPLYT RE+EHQ ND+ A+A
Sbjct: 66  LQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125

Query: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184
           +V ++N A+  E +V  T VKHV++T +  +LP  K  +++ V+KYVK MVP Y LP A+
Sbjct: 126 LVCLANMAHLAEAVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYHLPKAV 185

Query: 185 SMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGP 244
                L KG      +   + +D+A LQYTGGTTGVAKGA+LTHRN+VAN+LQ K   G 
Sbjct: 186 KFNDVLSKGHDQPVSEANPTSDDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCKALMGS 245

Query: 245 VLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAIT 304
            L EG E+++T LPLYH++A T +C+  + +G  N+LI+NPRD+P  VKEL K+ F+   
Sbjct: 246 NLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWKFSGFV 305

Query: 305 GVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSP 364
           G+NTLF AL NNE F +LDF  +K+ + GGMA+Q A AERWK  TG  + EGYG+TE SP
Sbjct: 306 GLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCPICEGYGMTETSP 365

Query: 365 LVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEA 424
           + T NP       G IG+PVPST  ++++DAG   P  ++GEL V+GPQVM+GYWQR +A
Sbjct: 366 VATVNPIQ-NIQIGTIGIPVPSTLCKVINDAGVEQPLGEIGELCVKGPQVMKGYWQRQDA 424

Query: 425 TKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEV 484
           T E+L++EGWL TGDI      G + IVDRKKDMIL+SGFNVYPNE+EDV+A    VL+ 
Sbjct: 425 TDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILISGFNVYPNELEDVLATLPGVLQC 484

Query: 485 AAIGQANDVSGELVKIYVVKR-DPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVG 543
           AAIG  ++ SGE +KI++V R   +LTK++V+ H R ++TGYKVPK VEFRD LP TNVG
Sbjct: 485 AAIGIPDEKSGEAIKIFIVARPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPTTNVG 544

Query: 544 KILRRVLREENDAQLAAK 561
           KILRR LR+E   +L  K
Sbjct: 545 KILRRELRDEELRKLGLK 562