Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

 Score =  601 bits (1550), Expect = e-176
 Identities = 294/561 (52%), Positives = 399/561 (71%), Gaps = 2/561 (0%)

Query: 2   DKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAF 61
           D  W  +YP  V   INPD+Y ++  + +QS  ++AD+PAF N+G  +T+ +L + S  F
Sbjct: 3   DNFWKDKYPVGVSSEINPDEYQNIQAVLKQSCERFADKPAFSNLGKTLTYGELYKLSGDF 62

Query: 62  AAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDAD 121
           AAYLQ +  L+ GDR+A+ +PNL+QYP+ +FG +RAG+I VN NPLYT RE+EHQ NDA 
Sbjct: 63  AAYLQQNTDLQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFNDAG 122

Query: 122 ARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLP 181
           A+A+V ++N A+  E+++  T +KHVV+T +  MLP  K  +V+ VVK+VK MVP Y LP
Sbjct: 123 AKALVCLANMAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYSLP 182

Query: 182 GAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGA 241
            A+ +  AL  GR     +     +D+A LQYTGGTTGVAKGA+LTHRN+VAN+LQ K  
Sbjct: 183 KAVKLNDALALGRGKPVREALPKSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCKAL 242

Query: 242 YGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFT 301
            G  L +G E+++  LPLYH++A T +C+  +  G  N+LI+NPRD+P  +K+L KY F+
Sbjct: 243 MGSNLNDGSEVLIAPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMIKDLGKYRFS 302

Query: 302 AITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTE 361
              G+NTLF AL N+EDF +LDF  +K+ + GGMA+Q A AERWK+ TG  + EGYGLTE
Sbjct: 303 GFVGLNTLFVALCNSEDFRKLDFSALKVTLSGGMALQLATAERWKQVTGCPICEGYGLTE 362

Query: 362 CSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQR 421
            SP+ + NP +     G+IG+PVPST+ ++++D G  +   ++GEL ++GPQVM+GYWQR
Sbjct: 363 TSPVASVNPIEHIQ-LGSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKGYWQR 421

Query: 422 PEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKV 481
           PEAT EV++A+GW  TGDI    + G I IVDRKKDMILVSGFNVYPNE+EDV+A    V
Sbjct: 422 PEATDEVIDAQGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPGV 481

Query: 482 LEVAAIGQANDVSGELVKIY-VVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT 540
           L+ AAIG  ++ SGE +K++ VVK   SLTK++V+ H   +LTGYK PK VEFRD LP T
Sbjct: 482 LQSAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPTT 541

Query: 541 NVGKILRRVLREENDAQLAAK 561
           NVGKILRR LR+E   +L  K
Sbjct: 542 NVGKILRRELRDEELRKLGHK 562